EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CBAJ_G0022732 (Gene tree)
Gene ID
-
Gene Symbol
Synj1
Alias
A930006D20Rik|AA675315|mKIAA0910
Full Name
synaptojanin 1
Gene Type
protein_coding
Species
Mus_musculus_cbaj
Status
putative
Strand
Minus strand
Length
80999 bases
Position
chr16:98946279-99027277
Accession
1354961
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CBAJ_P0044673Exo_endo_phosPF03372.231.1e-1411
MGP_CBAJ_P0044672Exo_endo_phosPF03372.231.5e-1411
MGP_CBAJ_P0044679Exo_endo_phosPF03372.232.6e-0711
MGP_CBAJ_P0044673DUF1866PF08952.111.8e-5711
MGP_CBAJ_P0044672DUF1866PF08952.112.1e-5711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CBAJ_T0044676-547-MGP_CBAJ_P0044676103 (aa)--
MGP_CBAJ_T0044677-354-MGP_CBAJ_P0044677117 (aa)--
MGP_CBAJ_T0044674-3492-MGP_CBAJ_P0044674188 (aa)--
MGP_CBAJ_T0044675-772--- (aa)--
MGP_CBAJ_T0044672-7082XM_006522837MGP_CBAJ_P00446721607 (aa)XP_006522900D3Z1M7
MGP_CBAJ_T0044673-6988-MGP_CBAJ_P00446731349 (aa)--
MGP_CBAJ_T0044680-947--- (aa)--
MGP_CBAJ_T0044678-2743--- (aa)--
MGP_CBAJ_T0044679-2189-MGP_CBAJ_P0044679693 (aa)--
Gene Model
Click here to download MGP_CBAJ_G0022732's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0022732's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CBAJ_G0022732Synj110059.770MGP_CBAJ_G0022808Synj29959.581

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us