EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0022936 (Gene tree)
Gene ID: -
Gene Symbol: Gm10226
Alias: -
Full Name: predicted gene 10226
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 1576 bases
Position: chr17:21836644-21838219
Accession: 3704470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0045352	zf-C2H2	PF00096.26	3.6e-22	1	3
MGP_CBAJ_P0045352	zf-C2H2	PF00096.26	3.6e-22	2	3
MGP_CBAJ_P0045352	zf-C2H2	PF00096.26	3.6e-22	3	3
MGP_CBAJ_P0045352	zf-met	PF12874.7	3.5e-07	1	2
MGP_CBAJ_P0045352	zf-met	PF12874.7	3.5e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0045352	-	255	-	MGP_CBAJ_P0045352	85 (aa)	-	O88253

Gene Model

Click here to download MGP_CBAJ_G0022936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0022936's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0022936	Gm10226	100	47.561	MGP_CBAJ_G0029174	Zbtb49	60	45.588
MGP_CBAJ_G0022936	Gm10226	100	50.000	MGP_CBAJ_G0018076	Zfp672	90	42.373
MGP_CBAJ_G0022936	Gm10226	100	48.193	MGP_CBAJ_G0030369	Repin1	55	46.341
MGP_CBAJ_G0022936	Gm10226	100	58.333	MGP_CBAJ_G0030842	Zfp637	57	58.333
MGP_CBAJ_G0022936	Gm10226	100	50.000	MGP_CBAJ_G0031240	Zfp784	71	50.000
MGP_CBAJ_G0022936	Gm10226	100	94.118	MGP_CBAJ_G0022930	Zfp51	79	94.118