EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0023196 (Gene tree)
Gene ID: -
Gene Symbol: Rrp1b
Alias: 2600005C20Rik|D030064A17|Kiaa0179|mKIAA0179
Full Name: ribosomal RNA processing 1 homolog B (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 26766 bases
Position: chr17:34361035-34387800
Accession: 1919712
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0046384	Nop52	PF05997.12	1.2e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0046390	-	578	-	MGP_CBAJ_P0046390	172 (aa)	-	-
MGP_CBAJ_T0046393	-	666	-	-	- (aa)	-	-
MGP_CBAJ_T0046388	-	1000	-	-	- (aa)	-	-
MGP_CBAJ_T0046389	-	564	-	-	- (aa)	-	-
MGP_CBAJ_T0046392	-	619	-	-	- (aa)	-	-
MGP_CBAJ_T0046384	-	4886	XM_006524971	MGP_CBAJ_P0046384	724 (aa)	XP_006525034	Q91YK2
MGP_CBAJ_T0046385	-	534	-	-	- (aa)	-	-
MGP_CBAJ_T0046386	-	719	-	MGP_CBAJ_P0046386	118 (aa)	-	-
MGP_CBAJ_T0046387	-	4499	-	-	- (aa)	-	-
MGP_CBAJ_T0046391	-	821	-	-	- (aa)	-	-
MGP_CBAJ_T0046394	-	489	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0023196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0023196's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0023196	Rrp1b	53	65.079	MGP_CBAJ_G0017156	Rrp1	56	53.043