EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0023588 (Gene tree)
Gene ID: -
Gene Symbol: Rab5a
Alias: 2410015H04Rik|AI663973|AU021172|nnyRab5a
Full Name: RAB5A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 32808 bases
Position: chr17:59282450-59315257
Accession: 105926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0047810	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0047810	-	2462	-	MGP_CBAJ_P0047810	215 (aa)	-	Q9CQD1

Gene Model

Click here to download MGP_CBAJ_G0023588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0023588's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0023588	Rab5a	74	38.125	MGP_CBAJ_G0015645	Rab23	67	38.125
MGP_CBAJ_G0023588	Rab5a	81	32.768	MGP_CBAJ_G0029787	Ran	85	32.768
MGP_CBAJ_G0023588	Rab5a	78	41.916	MGP_CBAJ_G0021002	Rab2b	79	44.079
MGP_CBAJ_G0023588	Rab5a	90	43.814	MGP_CBAJ_G0017793	Rab1a	95	43.814
MGP_CBAJ_G0023588	Rab5a	90	49.231	MGP_CBAJ_G0026654	Rab22a	98	49.231
MGP_CBAJ_G0023588	Rab5a	95	41.546	MGP_CBAJ_G0032241	Rab6a	98	41.546
MGP_CBAJ_G0023588	Rab5a	91	41.951	MGP_CBAJ_G0034597	Rab11a	88	48.148
MGP_CBAJ_G0023588	Rab5a	75	41.566	MGP_CBAJ_G0035341	Rab33a	70	41.566
MGP_CBAJ_G0023588	Rab5a	80	31.667	MGP_CBAJ_G0031143	Kras	94	31.667
MGP_CBAJ_G0023588	Rab5a	81	43.678	MGP_CBAJ_G0032181	Rab30	86	43.678
MGP_CBAJ_G0023588	Rab5a	75	41.615	MGP_CBAJ_G0027714	Rab2a	97	36.667
MGP_CBAJ_G0023588	Rab5a	95	42.718	MGP_CBAJ_G0034845	Rab6b	98	42.718
MGP_CBAJ_G0023588	Rab5a	74	35.928	MGP_CBAJ_G0021943	Rabl2	72	35.928
MGP_CBAJ_G0023588	Rab5a	90	37.436	MGP_CBAJ_G0029638	Rab35	96	37.436
MGP_CBAJ_G0023588	Rab5a	81	37.989	MGP_CBAJ_G0023687	Rab12	62	37.989
MGP_CBAJ_G0023588	Rab5a	73	32.500	MGP_CBAJ_G0018491	Rab34	62	32.500
MGP_CBAJ_G0023588	Rab5a	89	38.614	MGP_CBAJ_G0025362	Rab14	94	38.614
MGP_CBAJ_G0023588	Rab5a	75	36.585	MGP_CBAJ_G0035514	Rab39b	77	36.585
MGP_CBAJ_G0023588	Rab5a	77	40.351	MGP_CBAJ_G0026890	Rab33b	75	40.351
MGP_CBAJ_G0023588	Rab5a	78	31.737	MGP_CBAJ_G0031247	Rasl2-9	76	31.737
MGP_CBAJ_G0023588	Rab5a	95	41.951	MGP_CBAJ_G0019092	Rab37	93	41.951
MGP_CBAJ_G0023588	Rab5a	90	35.323	MGP_CBAJ_G0035761	Rab9b	97	35.323
MGP_CBAJ_G0023588	Rab5a	91	47.449	MGP_CBAJ_G0023678	Rab31	98	47.449
MGP_CBAJ_G0023588	Rab5a	60	32.576	MGP_CBAJ_G0016259	Arl8a	66	32.576
MGP_CBAJ_G0023588	Rab5a	55	30.159	MGP_CBAJ_G0019419	Arl4a	60	30.159
MGP_CBAJ_G0023588	Rab5a	91	30.244	MGP_CBAJ_G0017083	Rab36	77	30.244
MGP_CBAJ_G0023588	Rab5a	90	34.328	MGP_CBAJ_G0035911	Rab9	97	34.328
MGP_CBAJ_G0023588	Rab5a	56	33.065	MGP_CBAJ_G0030768	Arl8b	63	33.065
MGP_CBAJ_G0023588	Rab5a	74	40.881	MGP_CBAJ_G0019579	Rab15	75	40.881
MGP_CBAJ_G0023588	Rab5a	90	40.816	MGP_CBAJ_G0023833	Rab18	93	40.816
MGP_CBAJ_G0023588	Rab5a	80	41.243	MGP_CBAJ_G0030668	Rab7	97	45.263
MGP_CBAJ_G0023588	Rab5a	76	32.727	MGP_CBAJ_G0027365	Nras	99	34.667
MGP_CBAJ_G0023588	Rab5a	90	40.704	MGP_CBAJ_G0027089	Rab25	93	40.704
MGP_CBAJ_G0023588	Rab5a	73	49.045	MGP_CBAJ_G0023237	Rab11b	92	49.045
MGP_CBAJ_G0023588	Rab5a	90	46.429	MGP_CBAJ_G0024398	Rab1b	96	46.429
MGP_CBAJ_G0023588	Rab5a	100	87.500	MGP_CBAJ_G0018887	Rab5c	100	87.500
MGP_CBAJ_G0023588	Rab5a	100	81.860	MGP_CBAJ_G0017609	Rab5b	100	81.860
MGP_CBAJ_G0023588	Rab5a	73	33.121	MGP_CBAJ_G0029020	Rheb	85	33.121
MGP_CBAJ_G0023588	Rab5a	82	31.667	MGP_CBAJ_G0032883	Hras	94	31.667