EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0023752 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpll
Alias: 2510028H02Rik|2810036L13Rik|AI256697|AI852082|Hnrpll
Full Name: heterogeneous nuclear ribonucleoprotein L-like
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 37585 bases
Position: chr17:89513698-89551282
Accession: 1919942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0048257	RRM_5	PF13893.6	7.7e-62	1	2
MGP_CBAJ_P0048257	RRM_5	PF13893.6	7.7e-62	2	2
MGP_CBAJ_P0048258	RRM_5	PF13893.6	7.7e-62	1	2
MGP_CBAJ_P0048258	RRM_5	PF13893.6	7.7e-62	2	2
MGP_CBAJ_P0048257	RRM_1	PF00076.22	2.4e-21	1	2
MGP_CBAJ_P0048257	RRM_1	PF00076.22	2.4e-21	2	2
MGP_CBAJ_P0048258	RRM_1	PF00076.22	2.4e-21	1	2
MGP_CBAJ_P0048258	RRM_1	PF00076.22	2.4e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0048261	-	2765	-	-	- (aa)	-	-
MGP_CBAJ_T0048259	-	2742	-	MGP_CBAJ_P0048259	331 (aa)	-	-
MGP_CBAJ_T0048263	-	3020	-	-	- (aa)	-	-
MGP_CBAJ_T0048262	-	4651	-	-	- (aa)	-	-
MGP_CBAJ_T0048257	-	3116	-	MGP_CBAJ_P0048257	591 (aa)	-	Q921F4
MGP_CBAJ_T0048258	-	3009	-	MGP_CBAJ_P0048258	591 (aa)	-	-
MGP_CBAJ_T0048260	-	1868	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0023752's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0023752's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0023752	Hnrnpll	80	58.065	MGP_CBAJ_G0031632	Hnrnpl	100	63.393
MGP_CBAJ_G0023752	Hnrnpll	57	30.000	MGP_CBAJ_G0027502	Ptbp2	99	30.357