EuRBPDB

Description

Ensembl ID: MGP_CBAJ_G0023828 (Gene tree)
Gene ID: -
Gene Symbol: Zeb1
Alias: 3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1
Full Name: zinc finger E-box binding homeobox 1
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 198706 bases
Position: chr18:2599822-2798527
Accession: 1344313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0048516	zf-C2H2	PF00096.26	3.2e-24	1	6
MGP_CBAJ_P0048516	zf-C2H2	PF00096.26	3.2e-24	2	6
MGP_CBAJ_P0048516	zf-C2H2	PF00096.26	3.2e-24	3	6
MGP_CBAJ_P0048516	zf-C2H2	PF00096.26	3.2e-24	4	6
MGP_CBAJ_P0048516	zf-C2H2	PF00096.26	3.2e-24	5	6
MGP_CBAJ_P0048516	zf-C2H2	PF00096.26	3.2e-24	6	6
MGP_CBAJ_P0048519	zf-C2H2	PF00096.26	1.6e-17	1	4
MGP_CBAJ_P0048519	zf-C2H2	PF00096.26	1.6e-17	2	4
MGP_CBAJ_P0048519	zf-C2H2	PF00096.26	1.6e-17	3	4
MGP_CBAJ_P0048519	zf-C2H2	PF00096.26	1.6e-17	4	4
MGP_CBAJ_P0048516	zf-met	PF12874.7	2.2e-08	1	2
MGP_CBAJ_P0048516	zf-met	PF12874.7	2.2e-08	2	2
MGP_CBAJ_P0048519	zf-met	PF12874.7	5.6e-06	1	2
MGP_CBAJ_P0048519	zf-met	PF12874.7	5.6e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0048519	-	900	-	MGP_CBAJ_P0048519	293 (aa)	-	-
MGP_CBAJ_T0048518	-	1485	-	MGP_CBAJ_P0048518	105 (aa)	-	-
MGP_CBAJ_T0048517	-	1935	-	-	- (aa)	-	-
MGP_CBAJ_T0048516	-	5808	XM_006525770	MGP_CBAJ_P0048516	1117 (aa)	XP_006525832	Q64318
MGP_CBAJ_T0048520	-	1215	-	MGP_CBAJ_P0048520	19 (aa)	-	-
MGP_CBAJ_T0048521	-	790	-	-	- (aa)	-	-
MGP_CBAJ_T0048526	-	3333	-	MGP_CBAJ_P0048526	1110 (aa)	-	-
MGP_CBAJ_T0048527	-	2662	-	-	- (aa)	-	-
MGP_CBAJ_T0048524	-	2464	-	-	- (aa)	-	-
MGP_CBAJ_T0048525	-	1622	-	-	- (aa)	-	-
MGP_CBAJ_T0048522	-	774	-	MGP_CBAJ_P0048522	154 (aa)	-	-
MGP_CBAJ_T0048523	-	819	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0023828	Zeb1	100	69.340	MGP_CBAJ_G0025430	Zeb2	97	62.150