EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0023910 (Gene tree)
Gene ID: -
Gene Symbol: Celf4
Alias: A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik
Full Name: CUGBP%2C Elav-like family member 4
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 302017 bases
Position: chr18:24891776-25193792
Accession: 1932407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0048764	RRM_1	PF00076.22	7.3e-53	1	3
MGP_CBAJ_P0048764	RRM_1	PF00076.22	7.3e-53	2	3
MGP_CBAJ_P0048764	RRM_1	PF00076.22	7.3e-53	3	3
MGP_CBAJ_P0048763	RRM_1	PF00076.22	6.2e-43	1	3
MGP_CBAJ_P0048763	RRM_1	PF00076.22	6.2e-43	2	3
MGP_CBAJ_P0048763	RRM_1	PF00076.22	6.2e-43	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0048764	-	3997	-	MGP_CBAJ_P0048764	504 (aa)	-	-
MGP_CBAJ_T0048761	-	3501	XM_006525504	MGP_CBAJ_P0048761	453 (aa)	XP_006525571	Q7TSY6
MGP_CBAJ_T0048762	-	3228	-	MGP_CBAJ_P0048762	362 (aa)	-	-
MGP_CBAJ_T0048763	-	3937	-	MGP_CBAJ_P0048763	484 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0023910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0023910's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0023910	Celf4	84	63.333	MGP_CBAJ_G0017295	Celf5	85	66.667
MGP_CBAJ_G0023910	Celf4	100	41.787	MGP_CBAJ_G0025044	Celf2	90	55.556
MGP_CBAJ_G0023910	Celf4	91	35.802	MGP_CBAJ_G0028241	Elavl4	88	38.272
MGP_CBAJ_G0023910	Celf4	100	63.275	MGP_CBAJ_G0027235	Celf3	100	69.072
MGP_CBAJ_G0023910	Celf4	62	36.842	MGP_CBAJ_G0022842	Pabpc6	62	36.842
MGP_CBAJ_G0023910	Celf4	91	37.037	MGP_CBAJ_G0028108	Elavl2	88	39.506
MGP_CBAJ_G0023910	Celf4	100	42.430	MGP_CBAJ_G0025836	Celf1	100	45.200
MGP_CBAJ_G0023910	Celf4	68	40.789	MGP_CBAJ_G0035052	Rbms3	72	40.789
MGP_CBAJ_G0023910	Celf4	63	30.682	MGP_CBAJ_G0030638	Tia1	87	32.911
MGP_CBAJ_G0023910	Celf4	73	36.232	MGP_CBAJ_G0033001	Elavl1	95	43.210
MGP_CBAJ_G0023910	Celf4	99	67.066	MGP_CBAJ_G0034556	Celf6	100	67.200
MGP_CBAJ_G0023910	Celf4	67	39.744	MGP_CBAJ_G0034128	Elavl3	70	39.506
MGP_CBAJ_G0023910	Celf4	58	35.052	MGP_CBAJ_G0028401	Pabpc4	67	33.803