EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0024163 (Gene tree)
Gene ID: -
Gene Symbol: F830016B08Rik
Alias: Ifgga4
Full Name: RIKEN cDNA F830016B08 gene
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 16127 bases
Position: chr18:63772694-63788820
Accession: 3588218
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0049364	MMR_HSR1	PF01926.23	3.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0049364	-	2741	XM_006525926	MGP_CBAJ_P0049364	417 (aa)	XP_006525989	G3UWE2

Gene Model

Click here to download MGP_CBAJ_G0024163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0024163's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0024163	F830016B08Rik	78	33.028	MGP_CBAJ_G0017933	Irgm1	75	33.028
MGP_CBAJ_G0024163	F830016B08Rik	97	61.425	MGP_CBAJ_G0024162	Gm4841	98	61.520
MGP_CBAJ_G0024163	F830016B08Rik	97	47.561	MGP_CBAJ_G0024161	Gm4951	99	47.561
MGP_CBAJ_G0024163	F830016B08Rik	97	51.471	MGP_CBAJ_G0024164	Iigp1	99	51.471
MGP_CBAJ_G0024163	F830016B08Rik	88	34.211	MGP_CBAJ_G0031498	Irgc1	82	34.211
MGP_CBAJ_G0024163	F830016B08Rik	92	38.601	MGP_CBAJ_G0017941	Ifi47	92	38.601
MGP_CBAJ_G0024163	F830016B08Rik	93	46.310	MGP_CBAJ_G0017940	Tgtp2	94	46.310
MGP_CBAJ_G0024163	F830016B08Rik	88	30.526	MGP_CBAJ_G0018072	Igtp	85	30.628
MGP_CBAJ_G0024163	F830016B08Rik	93	46.310	MGP_CBAJ_G0017939	-	94	46.310