EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0024306 (Gene tree)
Gene ID: -
Gene Symbol: Zfp236
Alias: AI447957|Gm335|LOC240456
Full Name: zinc finger protein 236
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 123709 bases
Position: chr18:88889892-89013600
Accession: 1926950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	1	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	2	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	3	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	4	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	5	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	6	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	7	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	8	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	9	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	10	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	11	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	12	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	13	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	14	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	15	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	16	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	17	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	18	19
MGP_CBAJ_P0049840	zf-C2H2	PF00096.26	1.1e-110	19	19
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	1	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	2	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	3	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	4	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	5	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	6	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	7	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	8	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	9	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	10	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	11	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	12	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	13	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	14	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	15	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	16	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	17	18
MGP_CBAJ_P0049837	zf-C2H2	PF00096.26	5.8e-108	18	18
MGP_CBAJ_P0049843	zf-C2H2	PF00096.26	6.8e-06	1	1
MGP_CBAJ_P0049837	zf-met	PF12874.7	5.9e-06	1	4
MGP_CBAJ_P0049837	zf-met	PF12874.7	5.9e-06	2	4
MGP_CBAJ_P0049837	zf-met	PF12874.7	5.9e-06	3	4
MGP_CBAJ_P0049837	zf-met	PF12874.7	5.9e-06	4	4
MGP_CBAJ_P0049840	zf-met	PF12874.7	3.4e-05	1	4
MGP_CBAJ_P0049840	zf-met	PF12874.7	3.4e-05	2	4
MGP_CBAJ_P0049840	zf-met	PF12874.7	3.4e-05	3	4
MGP_CBAJ_P0049840	zf-met	PF12874.7	3.4e-05	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0049837	-	9626	XM_006526490	MGP_CBAJ_P0049837	1799 (aa)	XP_006526553	B2RR24
MGP_CBAJ_T0049839	-	3227	-	MGP_CBAJ_P0049839	42 (aa)	-	-
MGP_CBAJ_T0049838	-	9700	-	MGP_CBAJ_P0049838	1840 (aa)	-	-
MGP_CBAJ_T0049842	-	665	-	-	- (aa)	-	-
MGP_CBAJ_T0049843	-	410	-	MGP_CBAJ_P0049843	65 (aa)	-	-
MGP_CBAJ_T0049840	-	6059	-	MGP_CBAJ_P0049840	1847 (aa)	-	-
MGP_CBAJ_T0049841	-	6170	-	MGP_CBAJ_P0049841	485 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0024306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0024306's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0024306	Zfp236	59	41.096	MGP_CBAJ_G0031229	Zfp628	61	42.500
MGP_CBAJ_G0024306	Zfp236	75	45.283	MGP_CBAJ_G0022930	Zfp51	76	45.283
MGP_CBAJ_G0024306	Zfp236	57	36.242	MGP_CBAJ_G0033884	Snai3	67	47.297
MGP_CBAJ_G0024306	Zfp236	58	48.780	MGP_CBAJ_G0032703	Zfp768	53	45.536
MGP_CBAJ_G0024306	Zfp236	70	47.297	MGP_CBAJ_G0032704	-	86	47.297
MGP_CBAJ_G0024306	Zfp236	58	42.177	MGP_CBAJ_G0032707	E430018J23Rik	58	42.177
MGP_CBAJ_G0024306	Zfp236	74	43.411	MGP_CBAJ_G0031486	Zfp235	66	43.411
MGP_CBAJ_G0024306	Zfp236	80	46.575	MGP_CBAJ_G0020405	Zfp759	97	37.975
MGP_CBAJ_G0024306	Zfp236	78	40.690	MGP_CBAJ_G0033644	Zfp319	87	40.690
MGP_CBAJ_G0024306	Zfp236	71	35.669	MGP_CBAJ_G0030943	Zfp384	68	38.655
MGP_CBAJ_G0024306	Zfp236	81	35.802	MGP_CBAJ_G0031596	Zfp780b	84	40.351
MGP_CBAJ_G0024306	Zfp236	86	31.818	MGP_CBAJ_G0016906	Zbtb24	54	45.794
MGP_CBAJ_G0024306	Zfp236	65	44.643	MGP_CBAJ_G0031490	Zfp108	58	45.000
MGP_CBAJ_G0024306	Zfp236	62	43.529	MGP_CBAJ_G0031491	Zfp93	59	42.969
MGP_CBAJ_G0024306	Zfp236	62	42.857	MGP_CBAJ_G0031492	Zfp61	57	42.857
MGP_CBAJ_G0024306	Zfp236	70	48.864	MGP_CBAJ_G0026814	Mynn	62	48.864
MGP_CBAJ_G0024306	Zfp236	54	46.739	MGP_CBAJ_G0029510	Gfi1	100	46.739
MGP_CBAJ_G0024306	Zfp236	66	38.824	MGP_CBAJ_G0016294	Zbtb41	61	38.824
MGP_CBAJ_G0024306	Zfp236	76	34.940	MGP_CBAJ_G0032730	Zfp646	90	34.940
MGP_CBAJ_G0024306	Zfp236	62	44.318	MGP_CBAJ_G0034135	Zfp872	94	40.800
MGP_CBAJ_G0024306	Zfp236	69	42.222	MGP_CBAJ_G0022928	Zfp677	78	42.222
MGP_CBAJ_G0024306	Zfp236	72	44.545	MGP_CBAJ_G0026587	Zfp334	68	46.667
MGP_CBAJ_G0024306	Zfp236	78	41.667	MGP_CBAJ_G0026625	Zfp64	70	42.500
MGP_CBAJ_G0024306	Zfp236	81	53.333	MGP_CBAJ_G0026624	Sall4	73	53.333
MGP_CBAJ_G0024306	Zfp236	64	39.806	MGP_CBAJ_G0031485	Zfp112	52	42.742
MGP_CBAJ_G0024306	Zfp236	63	42.500	MGP_CBAJ_G0031523	Zfp574	95	41.304
MGP_CBAJ_G0024306	Zfp236	79	38.732	MGP_CBAJ_G0022951	Zfp945	79	40.000
MGP_CBAJ_G0024306	Zfp236	76	37.143	MGP_CBAJ_G0022959	Zscan10	99	37.143
MGP_CBAJ_G0024306	Zfp236	69	40.559	MGP_CBAJ_G0021719	Zfp251	79	40.559
MGP_CBAJ_G0024306	Zfp236	78	36.471	MGP_CBAJ_G0018076	Zfp672	96	41.096
MGP_CBAJ_G0024306	Zfp236	71	41.228	MGP_CBAJ_G0033576	Zfp423	94	41.228
MGP_CBAJ_G0024306	Zfp236	68	50.000	MGP_CBAJ_G0020428	-	78	43.750
MGP_CBAJ_G0024306	Zfp236	61	41.228	MGP_CBAJ_G0026162	Zfp661	69	42.857
MGP_CBAJ_G0024306	Zfp236	63	42.697	MGP_CBAJ_G0017981	Zfp454	75	42.982
MGP_CBAJ_G0024306	Zfp236	59	41.748	MGP_CBAJ_G0018713	Zfp652	60	41.748
MGP_CBAJ_G0024306	Zfp236	62	43.023	MGP_CBAJ_G0029174	Zbtb49	62	47.887
MGP_CBAJ_G0024306	Zfp236	71	40.157	MGP_CBAJ_G0018126	Zfp867	94	45.902
MGP_CBAJ_G0024306	Zfp236	66	45.455	MGP_CBAJ_G0030842	Zfp637	85	51.807
MGP_CBAJ_G0024306	Zfp236	79	47.059	MGP_CBAJ_G0031659	Zfp420	99	47.059
MGP_CBAJ_G0024306	Zfp236	58	47.727	MGP_CBAJ_G0020404	Rslcan18	70	47.727
MGP_CBAJ_G0024306	Zfp236	81	44.304	MGP_CBAJ_G0030369	Repin1	99	41.667
MGP_CBAJ_G0024306	Zfp236	69	42.727	MGP_CBAJ_G0028710	Zbtb17	61	42.727
MGP_CBAJ_G0024306	Zfp236	69	44.643	MGP_CBAJ_G0031237	Zfp865	78	44.643
MGP_CBAJ_G0024306	Zfp236	70	42.991	MGP_CBAJ_G0033431	Zfp709	86	43.750
MGP_CBAJ_G0024306	Zfp236	70	41.121	MGP_CBAJ_G0033432	Zfp882	87	45.652
MGP_CBAJ_G0024306	Zfp236	77	43.860	MGP_CBAJ_G0030499	Prdm5	87	46.739
MGP_CBAJ_G0024306	Zfp236	53	30.734	MGP_CBAJ_G0031240	Zfp784	79	40.244
MGP_CBAJ_G0024306	Zfp236	74	42.857	MGP_CBAJ_G0031792	Zfp715	69	41.935
MGP_CBAJ_G0024306	Zfp236	62	42.647	MGP_CBAJ_G0031493	Zfp94	76	42.647
MGP_CBAJ_G0024306	Zfp236	60	45.652	MGP_CBAJ_G0033801	Zfp1	67	45.652