EuRBPDB

Description

Ensembl ID: MGP_CBAJ_G0024715 (Gene tree)
Gene ID: -
Gene Symbol: Smarca2
Alias: 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 199674 bases
Position: chr19:26845624-27045297
Accession: 99603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0051032	ResIII	PF04851.15	3.9e-08	1	1
MGP_CBAJ_P0051033	ResIII	PF04851.15	4e-08	1	1
MGP_CBAJ_P0051032	BRK	PF07533.16	3.7e-17	1	1
MGP_CBAJ_P0051033	BRK	PF07533.16	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0051048	-	736	-	MGP_CBAJ_P0051048	119 (aa)	-	-
MGP_CBAJ_T0051047	-	968	-	MGP_CBAJ_P0051047	119 (aa)	-	-
MGP_CBAJ_T0051046	-	1460	-	MGP_CBAJ_P0051046	113 (aa)	-	-
MGP_CBAJ_T0051045	-	468	-	MGP_CBAJ_P0051045	83 (aa)	-	-
MGP_CBAJ_T0051044	-	835	-	MGP_CBAJ_P0051044	235 (aa)	-	-
MGP_CBAJ_T0051043	-	1858	-	MGP_CBAJ_P0051043	236 (aa)	-	-
MGP_CBAJ_T0051042	-	879	-	MGP_CBAJ_P0051042	276 (aa)	-	-
MGP_CBAJ_T0051041	-	788	-	MGP_CBAJ_P0051041	224 (aa)	-	-
MGP_CBAJ_T0051040	-	942	-	MGP_CBAJ_P0051040	254 (aa)	-	-
MGP_CBAJ_T0051036	-	1584	-	-	- (aa)	-	-
MGP_CBAJ_T0051037	-	867	-	-	- (aa)	-	-
MGP_CBAJ_T0051034	-	863	-	MGP_CBAJ_P0051034	212 (aa)	-	-
MGP_CBAJ_T0051035	-	661	-	-	- (aa)	-	-
MGP_CBAJ_T0051032	-	5858	XM_006527281	MGP_CBAJ_P0051032	1583 (aa)	XP_006527344	A0A140LHE2
MGP_CBAJ_T0051033	-	5862	-	MGP_CBAJ_P0051033	1601 (aa)	-	-
MGP_CBAJ_T0051038	-	426	-	-	- (aa)	-	-
MGP_CBAJ_T0051039	-	929	-	MGP_CBAJ_P0051039	254 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0024715	Smarca2	70	80.240	MGP_CBAJ_G0034113	Smarca4	92	79.726