EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0025044 (Gene tree)
Gene ID: -
Gene Symbol: Celf2
Alias: B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|ETR-3|Etr-3|Napor|Napor-2|mETR-3
Full Name: CUGBP%2C Elav-like family member 2
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 1068369 bases
Position: chr2:3993932-5062300
Accession: 1338822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0052092	RRM_1	PF00076.22	2.5e-51	1	3
MGP_CBAJ_P0052092	RRM_1	PF00076.22	2.5e-51	2	3
MGP_CBAJ_P0052092	RRM_1	PF00076.22	2.5e-51	3	3
MGP_CBAJ_P0052095	RRM_1	PF00076.22	2.5e-51	1	3
MGP_CBAJ_P0052095	RRM_1	PF00076.22	2.5e-51	2	3
MGP_CBAJ_P0052095	RRM_1	PF00076.22	2.5e-51	3	3
MGP_CBAJ_P0052101	RRM_1	PF00076.22	2.6e-51	1	3
MGP_CBAJ_P0052101	RRM_1	PF00076.22	2.6e-51	2	3
MGP_CBAJ_P0052101	RRM_1	PF00076.22	2.6e-51	3	3
MGP_CBAJ_P0052102	RRM_1	PF00076.22	2.6e-51	1	3
MGP_CBAJ_P0052102	RRM_1	PF00076.22	2.6e-51	2	3
MGP_CBAJ_P0052102	RRM_1	PF00076.22	2.6e-51	3	3
MGP_CBAJ_P0052103	RRM_1	PF00076.22	2.7e-51	1	3
MGP_CBAJ_P0052103	RRM_1	PF00076.22	2.7e-51	2	3
MGP_CBAJ_P0052103	RRM_1	PF00076.22	2.7e-51	3	3
MGP_CBAJ_P0052098	RRM_1	PF00076.22	3.1e-51	1	3
MGP_CBAJ_P0052098	RRM_1	PF00076.22	3.1e-51	2	3
MGP_CBAJ_P0052098	RRM_1	PF00076.22	3.1e-51	3	3
MGP_CBAJ_P0052094	RRM_1	PF00076.22	3.2e-51	1	3
MGP_CBAJ_P0052094	RRM_1	PF00076.22	3.2e-51	2	3
MGP_CBAJ_P0052094	RRM_1	PF00076.22	3.2e-51	3	3
MGP_CBAJ_P0052096	RRM_1	PF00076.22	3.2e-51	1	3
MGP_CBAJ_P0052096	RRM_1	PF00076.22	3.2e-51	2	3
MGP_CBAJ_P0052096	RRM_1	PF00076.22	3.2e-51	3	3
MGP_CBAJ_P0052100	RRM_1	PF00076.22	3.4e-51	1	3
MGP_CBAJ_P0052100	RRM_1	PF00076.22	3.4e-51	2	3
MGP_CBAJ_P0052100	RRM_1	PF00076.22	3.4e-51	3	3
MGP_CBAJ_P0052099	RRM_1	PF00076.22	4.9e-39	1	3
MGP_CBAJ_P0052099	RRM_1	PF00076.22	4.9e-39	2	3
MGP_CBAJ_P0052099	RRM_1	PF00076.22	4.9e-39	3	3
MGP_CBAJ_P0052104	RRM_1	PF00076.22	5.8e-39	1	3
MGP_CBAJ_P0052104	RRM_1	PF00076.22	5.8e-39	2	3
MGP_CBAJ_P0052104	RRM_1	PF00076.22	5.8e-39	3	3
MGP_CBAJ_P0052093	RRM_1	PF00076.22	6.1e-39	1	3
MGP_CBAJ_P0052093	RRM_1	PF00076.22	6.1e-39	2	3
MGP_CBAJ_P0052093	RRM_1	PF00076.22	6.1e-39	3	3
MGP_CBAJ_P0052097	RRM_1	PF00076.22	6.5e-39	1	3
MGP_CBAJ_P0052097	RRM_1	PF00076.22	6.5e-39	2	3
MGP_CBAJ_P0052097	RRM_1	PF00076.22	6.5e-39	3	3
MGP_CBAJ_P0052111	RRM_1	PF00076.22	7.5e-19	1	1
MGP_CBAJ_P0052107	RRM_1	PF00076.22	2.4e-15	1	1
MGP_CBAJ_P0052114	RRM_1	PF00076.22	2.2e-14	1	1
MGP_CBAJ_P0052116	RRM_1	PF00076.22	1.1e-13	1	1
MGP_CBAJ_P0052117	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0052095	-	7493	-	MGP_CBAJ_P0052095	484 (aa)	-	-
MGP_CBAJ_T0052094	-	8739	-	MGP_CBAJ_P0052094	526 (aa)	-	-
MGP_CBAJ_T0052097	-	3853	-	MGP_CBAJ_P0052097	472 (aa)	-	-
MGP_CBAJ_T0052096	-	5474	-	MGP_CBAJ_P0052096	526 (aa)	-	-
MGP_CBAJ_T0052093	-	8857	-	MGP_CBAJ_P0052093	478 (aa)	-	-
MGP_CBAJ_T0052092	-	7720	XM_006497333	MGP_CBAJ_P0052092	484 (aa)	XP_006497396	Q9Z0H4
MGP_CBAJ_T0052099	-	2223	-	MGP_CBAJ_P0052099	440 (aa)	-	-
MGP_CBAJ_T0052098	-	3586	-	MGP_CBAJ_P0052098	508 (aa)	-	-
MGP_CBAJ_T0052118	-	1972	-	-	- (aa)	-	-
MGP_CBAJ_T0052119	-	769	-	-	- (aa)	-	-
MGP_CBAJ_T0052110	-	923	-	-	- (aa)	-	-
MGP_CBAJ_T0052111	-	630	-	MGP_CBAJ_P0052111	134 (aa)	-	-
MGP_CBAJ_T0052112	-	4802	-	-	- (aa)	-	-
MGP_CBAJ_T0052113	-	2075	-	-	- (aa)	-	-
MGP_CBAJ_T0052114	-	402	-	MGP_CBAJ_P0052114	92 (aa)	-	-
MGP_CBAJ_T0052115	-	4143	-	-	- (aa)	-	-
MGP_CBAJ_T0052116	-	529	-	MGP_CBAJ_P0052116	159 (aa)	-	-
MGP_CBAJ_T0052117	-	331	-	MGP_CBAJ_P0052117	46 (aa)	-	-
MGP_CBAJ_T0052107	-	1024	-	MGP_CBAJ_P0052107	276 (aa)	-	-
MGP_CBAJ_T0052106	-	1240	-	-	- (aa)	-	-
MGP_CBAJ_T0052105	-	1996	-	MGP_CBAJ_P0052105	443 (aa)	-	-
MGP_CBAJ_T0052104	-	2176	-	MGP_CBAJ_P0052104	460 (aa)	-	-
MGP_CBAJ_T0052103	-	2337	-	MGP_CBAJ_P0052103	490 (aa)	-	-
MGP_CBAJ_T0052102	-	2331	-	MGP_CBAJ_P0052102	488 (aa)	-	-
MGP_CBAJ_T0052101	-	1721	-	MGP_CBAJ_P0052101	488 (aa)	-	-
MGP_CBAJ_T0052100	-	2525	-	MGP_CBAJ_P0052100	520 (aa)	-	-
MGP_CBAJ_T0052109	-	405	-	-	- (aa)	-	-
MGP_CBAJ_T0052108	-	4798	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0025044's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0025044's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0025044	Celf2	79	80.952	MGP_CBAJ_G0034556	Celf6	91	45.567
MGP_CBAJ_G0025044	Celf2	82	34.667	MGP_CBAJ_G0034128	Elavl3	73	40.741
MGP_CBAJ_G0025044	Celf2	77	35.211	MGP_CBAJ_G0033470	-	53	30.000
MGP_CBAJ_G0025044	Celf2	64	43.210	MGP_CBAJ_G0033001	Elavl1	81	43.210
MGP_CBAJ_G0025044	Celf2	61	34.177	MGP_CBAJ_G0032753	Tial1	65	31.481
MGP_CBAJ_G0025044	Celf2	59	37.500	MGP_CBAJ_G0028401	Pabpc4	68	31.944
MGP_CBAJ_G0025044	Celf2	57	34.884	MGP_CBAJ_G0026528	Pabpc1l	53	34.884
MGP_CBAJ_G0025044	Celf2	51	35.443	MGP_CBAJ_G0030638	Tia1	83	35.443
MGP_CBAJ_G0025044	Celf2	57	34.211	MGP_CBAJ_G0022842	Pabpc6	51	34.211
MGP_CBAJ_G0025044	Celf2	94	83.333	MGP_CBAJ_G0027235	Celf3	90	55.801
MGP_CBAJ_G0025044	Celf2	77	39.474	MGP_CBAJ_G0017581	Rbms2	51	39.474
MGP_CBAJ_G0025044	Celf2	61	35.714	MGP_CBAJ_G0015777	Boll	57	32.000
MGP_CBAJ_G0025044	Celf2	100	88.060	MGP_CBAJ_G0025836	Celf1	100	80.082
MGP_CBAJ_G0025044	Celf2	82	33.333	MGP_CBAJ_G0017221	Cirbp	80	32.558
MGP_CBAJ_G0025044	Celf2	88	32.099	MGP_CBAJ_G0035395	Rbmx	78	30.000
MGP_CBAJ_G0025044	Celf2	92	53.659	MGP_CBAJ_G0017295	Celf5	52	53.659
MGP_CBAJ_G0025044	Celf2	61	38.272	MGP_CBAJ_G0028241	Elavl4	81	38.272
MGP_CBAJ_G0025044	Celf2	77	39.474	MGP_CBAJ_G0035052	Rbms3	75	37.079
MGP_CBAJ_G0025044	Celf2	90	55.556	MGP_CBAJ_G0023910	Celf4	100	41.787
MGP_CBAJ_G0025044	Celf2	87	33.333	MGP_CBAJ_G0028108	Elavl2	83	39.506