EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0025211 (Gene tree)
Gene ID: -
Gene Symbol: Rpl7a
Alias: Surf-3|Surf3|surfeit 3
Full Name: ribosomal protein L7A
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 7536 bases
Position: chr2:26611143-26618678
Accession: 1353472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0053057	Ribosomal_L7Ae	PF01248.26	1.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0053057	-	941	-	MGP_CBAJ_P0053057	275 (aa)	-	P12970
MGP_CBAJ_T0053058	-	835	-	-	- (aa)	-	-
MGP_CBAJ_T0053059	-	1000	-	-	- (aa)	-	-
MGP_CBAJ_T0053065	-	356	-	-	- (aa)	-	-
MGP_CBAJ_T0053064	-	593	-	-	- (aa)	-	-
MGP_CBAJ_T0053063	-	834	-	-	- (aa)	-	-
MGP_CBAJ_T0053062	-	877	-	-	- (aa)	-	-
MGP_CBAJ_T0053061	-	3767	-	MGP_CBAJ_P0053061	1237 (aa)	-	-
MGP_CBAJ_T0053060	-	3803	-	MGP_CBAJ_P0053060	1249 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0025211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0025211's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0025211	Rpl7a	100	87.273	MGP_CBAJ_G0031468	-	94	94.118
MGP_CBAJ_G0025211	Rpl7a	87	84.100	MGP_CBAJ_G0026419	Gm14214	99	92.157
MGP_CBAJ_G0025211	Rpl7a	76	100.000	MGP_CBAJ_G0034646	Gm4978	93	100.000