EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0025298 (Gene tree)
Gene ID: -
Gene Symbol: Fubp3
Alias: A330051M14Rik|AV006371|FBP3|Marta2
Full Name: far upstream element (FUSE) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 44818 bases
Position: chr2:31969830-32014647
Accession: 2443699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0053609	KH_1	PF00013.29	1e-68	1	4
MGP_CBAJ_P0053609	KH_1	PF00013.29	1e-68	2	4
MGP_CBAJ_P0053609	KH_1	PF00013.29	1e-68	3	4
MGP_CBAJ_P0053609	KH_1	PF00013.29	1e-68	4	4
MGP_CBAJ_P0053613	KH_1	PF00013.29	1.1e-68	1	4
MGP_CBAJ_P0053613	KH_1	PF00013.29	1.1e-68	2	4
MGP_CBAJ_P0053613	KH_1	PF00013.29	1.1e-68	3	4
MGP_CBAJ_P0053613	KH_1	PF00013.29	1.1e-68	4	4
MGP_CBAJ_P0053616	KH_1	PF00013.29	7.6e-19	1	1
MGP_CBAJ_P0053612	KH_1	PF00013.29	8.1e-11	1	1
MGP_CBAJ_P0053609	KH_2	PF07650.17	7.7e-21	1	1
MGP_CBAJ_P0053613	KH_2	PF07650.17	8e-21	1	1
MGP_CBAJ_P0053616	KH_2	PF07650.17	1.4e-05	1	1
MGP_CBAJ_P0053617	DUF1897	PF09005.10	4.2e-09	1	2
MGP_CBAJ_P0053617	DUF1897	PF09005.10	4.2e-09	2	2
MGP_CBAJ_P0053618	DUF1897	PF09005.10	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0053614	-	453	-	MGP_CBAJ_P0053614	83 (aa)	-	-
MGP_CBAJ_T0053615	-	908	-	MGP_CBAJ_P0053615	191 (aa)	-	-
MGP_CBAJ_T0053616	-	1073	-	MGP_CBAJ_P0053616	263 (aa)	-	-
MGP_CBAJ_T0053617	-	835	-	MGP_CBAJ_P0053617	103 (aa)	-	-
MGP_CBAJ_T0053610	-	372	-	MGP_CBAJ_P0053610	97 (aa)	-	-
MGP_CBAJ_T0053611	-	1909	-	-	- (aa)	-	-
MGP_CBAJ_T0053612	-	425	-	MGP_CBAJ_P0053612	123 (aa)	-	-
MGP_CBAJ_T0053613	-	3640	-	MGP_CBAJ_P0053613	575 (aa)	-	-
MGP_CBAJ_T0053609	-	3260	XM_006498126	MGP_CBAJ_P0053609	569 (aa)	XP_006498189	A0A0A6YVV5
MGP_CBAJ_T0053618	-	437	-	MGP_CBAJ_P0053618	52 (aa)	-	-
MGP_CBAJ_T0053619	-	2334	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0025298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0025298's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0025298	Fubp3	77	31.973	MGP_CBAJ_G0017123	Pcbp3	85	31.973
MGP_CBAJ_G0025298	Fubp3	88	32.370	MGP_CBAJ_G0030641	Pcbp1	60	31.169
MGP_CBAJ_G0025298	Fubp3	58	30.000	MGP_CBAJ_G0022369	Igf2bp2	66	30.000
MGP_CBAJ_G0025298	Fubp3	95	58.824	MGP_CBAJ_G0023648	Khsrp	84	48.682
MGP_CBAJ_G0025298	Fubp3	70	36.000	MGP_CBAJ_G0034883	Pcbp4	83	36.000
MGP_CBAJ_G0025298	Fubp3	96	64.324	MGP_CBAJ_G0027664	Fubp1	94	59.208