EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0025430 (Gene tree)
Gene ID: -
Gene Symbol: Zeb2
Alias: 9130203F04Rik|D130016B08Rik|SIP1|Sip1|Zfhx1b|Zfx1b|Zfxh1b
Full Name: zinc finger E-box binding homeobox 2
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 141912 bases
Position: chr2:47088489-47230400
Accession: 1344407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0054303	zf-C2H2	PF00096.26	1.8e-24	1	5
MGP_CBAJ_P0054303	zf-C2H2	PF00096.26	1.8e-24	2	5
MGP_CBAJ_P0054303	zf-C2H2	PF00096.26	1.8e-24	3	5
MGP_CBAJ_P0054303	zf-C2H2	PF00096.26	1.8e-24	4	5
MGP_CBAJ_P0054303	zf-C2H2	PF00096.26	1.8e-24	5	5
MGP_CBAJ_P0054305	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_CBAJ_P0054305	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_CBAJ_P0054305	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_CBAJ_P0054305	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_CBAJ_P0054305	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_CBAJ_P0054299	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_CBAJ_P0054299	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_CBAJ_P0054299	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_CBAJ_P0054299	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_CBAJ_P0054299	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_CBAJ_P0054302	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_CBAJ_P0054302	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_CBAJ_P0054302	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_CBAJ_P0054302	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_CBAJ_P0054302	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_CBAJ_P0054304	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_CBAJ_P0054304	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_CBAJ_P0054304	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_CBAJ_P0054304	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_CBAJ_P0054304	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_CBAJ_P0054301	zf-C2H2	PF00096.26	2.9e-24	1	5
MGP_CBAJ_P0054301	zf-C2H2	PF00096.26	2.9e-24	2	5
MGP_CBAJ_P0054301	zf-C2H2	PF00096.26	2.9e-24	3	5
MGP_CBAJ_P0054301	zf-C2H2	PF00096.26	2.9e-24	4	5
MGP_CBAJ_P0054301	zf-C2H2	PF00096.26	2.9e-24	5	5
MGP_CBAJ_P0054306	zf-C2H2	PF00096.26	1.2e-17	1	4
MGP_CBAJ_P0054306	zf-C2H2	PF00096.26	1.2e-17	2	4
MGP_CBAJ_P0054306	zf-C2H2	PF00096.26	1.2e-17	3	4
MGP_CBAJ_P0054306	zf-C2H2	PF00096.26	1.2e-17	4	4
MGP_CBAJ_P0054300	zf-C2H2	PF00096.26	1.2e-15	1	3
MGP_CBAJ_P0054300	zf-C2H2	PF00096.26	1.2e-15	2	3
MGP_CBAJ_P0054300	zf-C2H2	PF00096.26	1.2e-15	3	3
MGP_CBAJ_P0054303	zf-met	PF12874.7	1.4e-06	1	1
MGP_CBAJ_P0054305	zf-met	PF12874.7	1.7e-06	1	1
MGP_CBAJ_P0054299	zf-met	PF12874.7	1.7e-06	1	1
MGP_CBAJ_P0054302	zf-met	PF12874.7	1.7e-06	1	1
MGP_CBAJ_P0054304	zf-met	PF12874.7	1.7e-06	1	1
MGP_CBAJ_P0054301	zf-met	PF12874.7	2.3e-06	1	1
MGP_CBAJ_P0054306	zf-met	PF12874.7	5.8e-05	1	2
MGP_CBAJ_P0054306	zf-met	PF12874.7	5.8e-05	2	2
MGP_CBAJ_P0054300	zf-met	PF12874.7	0.00041	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0054325	-	3837	-	-	- (aa)	-	-
MGP_CBAJ_T0054324	-	644	-	-	- (aa)	-	-
MGP_CBAJ_T0054326	-	432	-	-	- (aa)	-	-
MGP_CBAJ_T0054321	-	2688	-	-	- (aa)	-	-
MGP_CBAJ_T0054320	-	2606	-	-	- (aa)	-	-
MGP_CBAJ_T0054323	-	370	-	-	- (aa)	-	-
MGP_CBAJ_T0054322	-	2987	-	-	- (aa)	-	-
MGP_CBAJ_T0054303	-	4063	-	MGP_CBAJ_P0054303	1191 (aa)	-	-
MGP_CBAJ_T0054302	-	5623	-	MGP_CBAJ_P0054302	1215 (aa)	-	-
MGP_CBAJ_T0054301	-	5334	-	MGP_CBAJ_P0054301	1259 (aa)	-	-
MGP_CBAJ_T0054300	-	1762	-	MGP_CBAJ_P0054300	220 (aa)	-	-
MGP_CBAJ_T0054307	-	868	-	MGP_CBAJ_P0054307	214 (aa)	-	-
MGP_CBAJ_T0054306	-	2236	-	MGP_CBAJ_P0054306	731 (aa)	-	-
MGP_CBAJ_T0054305	-	3913	-	MGP_CBAJ_P0054305	1214 (aa)	-	-
MGP_CBAJ_T0054304	-	4020	-	MGP_CBAJ_P0054304	1215 (aa)	-	-
MGP_CBAJ_T0054309	-	709	-	MGP_CBAJ_P0054309	184 (aa)	-	-
MGP_CBAJ_T0054308	-	240	-	MGP_CBAJ_P0054308	79 (aa)	-	-
MGP_CBAJ_T0054299	-	9129	XM_006498042	MGP_CBAJ_P0054299	1215 (aa)	XP_006498105	Q9R0G7
MGP_CBAJ_T0054314	-	2621	-	-	- (aa)	-	-
MGP_CBAJ_T0054315	-	2916	-	-	- (aa)	-	-
MGP_CBAJ_T0054316	-	550	-	MGP_CBAJ_P0054316	91 (aa)	-	-
MGP_CBAJ_T0054317	-	577	-	MGP_CBAJ_P0054317	63 (aa)	-	-
MGP_CBAJ_T0054310	-	453	-	-	- (aa)	-	-
MGP_CBAJ_T0054311	-	631	-	MGP_CBAJ_P0054311	141 (aa)	-	-
MGP_CBAJ_T0054312	-	618	-	-	- (aa)	-	-
MGP_CBAJ_T0054313	-	443	-	MGP_CBAJ_P0054313	113 (aa)	-	-
MGP_CBAJ_T0054318	-	462	-	MGP_CBAJ_P0054318	83 (aa)	-	-
MGP_CBAJ_T0054319	-	2068	-	MGP_CBAJ_P0054319	37 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0025430's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0025430	Zeb2	97	62.150	MGP_CBAJ_G0023828	Zeb1	100	69.340