EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0025446 (Gene tree)
Gene ID: -
Gene Symbol: Arl5a
Alias: 2410015N24Rik|2810410P22Rik|AA408731|AW610751|Arl5|T25534
Full Name: ADP-ribosylation factor-like 5A
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 31851 bases
Position: chr2:55267424-55299274
Accession: 1922673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0054419	MMR_HSR1	PF01926.23	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0054419	-	5245	-	MGP_CBAJ_P0054419	179 (aa)	-	-
MGP_CBAJ_T0054418	-	4980	XM_011239204	MGP_CBAJ_P0054418	179 (aa)	XP_011237506	Q80ZU0
MGP_CBAJ_T0054420	-	455	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0025446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0025446's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0025446	Arl5a	96	42.197	MGP_CBAJ_G0024922	Arl3	95	42.197
MGP_CBAJ_G0025446	Arl5a	100	45.556	MGP_CBAJ_G0030182	Arf5	100	45.556
MGP_CBAJ_G0025446	Arl5a	98	72.000	MGP_CBAJ_G0018772	Arl5c	98	72.000
MGP_CBAJ_G0025446	Arl5a	99	49.438	MGP_CBAJ_G0018120	Arf1	98	49.438
MGP_CBAJ_G0025446	Arl5a	97	38.587	MGP_CBAJ_G0026713	Arfrp1	93	38.938
MGP_CBAJ_G0025446	Arl5a	91	38.095	MGP_CBAJ_G0018930	Arl4d	84	38.095
MGP_CBAJ_G0025446	Arl5a	99	49.438	MGP_CBAJ_G0022011	Arf3	98	49.438
MGP_CBAJ_G0025446	Arl5a	88	41.463	MGP_CBAJ_G0016030	Arl4c	85	41.463
MGP_CBAJ_G0025446	Arl5a	63	33.913	MGP_CBAJ_G0020280	Arl10	55	33.913
MGP_CBAJ_G0025446	Arl5a	99	49.438	MGP_CBAJ_G0018991	Arf2	98	49.438
MGP_CBAJ_G0025446	Arl5a	99	35.000	MGP_CBAJ_G0026986	Arl14	92	35.000
MGP_CBAJ_G0025446	Arl5a	100	79.888	MGP_CBAJ_G0025078	Arl5b	98	81.437
MGP_CBAJ_G0025446	Arl5a	91	50.307	MGP_CBAJ_G0017365	Arl1	98	49.438
MGP_CBAJ_G0025446	Arl5a	93	37.647	MGP_CBAJ_G0022635	Arl6	91	37.647
MGP_CBAJ_G0025446	Arl5a	89	41.566	MGP_CBAJ_G0019419	Arl4a	83	41.566
MGP_CBAJ_G0025446	Arl5a	92	38.788	MGP_CBAJ_G0021148	Arl11	94	38.788
MGP_CBAJ_G0025446	Arl5a	93	42.771	MGP_CBAJ_G0024457	Arl2	90	42.771