EuRBPDB

Description

Ensembl ID: MGP_CBAJ_G0025836 (Gene tree)
Gene ID: -
Gene Symbol: Celf1
Alias: 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp|Cugbp1|D2Wsu101e|HNAB50|NAB50
Full Name: CUGBP%2C Elav-like family member 1
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 85588 bases
Position: chr2:98730237-98815824
Accession: 1342295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0055645	RRM_1	PF00076.22	4e-52	1	3
MGP_CBAJ_P0055645	RRM_1	PF00076.22	4e-52	2	3
MGP_CBAJ_P0055645	RRM_1	PF00076.22	4e-52	3	3
MGP_CBAJ_P0055639	RRM_1	PF00076.22	4.2e-52	1	3
MGP_CBAJ_P0055639	RRM_1	PF00076.22	4.2e-52	2	3
MGP_CBAJ_P0055639	RRM_1	PF00076.22	4.2e-52	3	3
MGP_CBAJ_P0055644	RRM_1	PF00076.22	5.2e-52	1	3
MGP_CBAJ_P0055644	RRM_1	PF00076.22	5.2e-52	2	3
MGP_CBAJ_P0055644	RRM_1	PF00076.22	5.2e-52	3	3
MGP_CBAJ_P0055642	RRM_1	PF00076.22	6.7e-52	1	3
MGP_CBAJ_P0055642	RRM_1	PF00076.22	6.7e-52	2	3
MGP_CBAJ_P0055642	RRM_1	PF00076.22	6.7e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0055645	-	4432	-	MGP_CBAJ_P0055645	483 (aa)	-	-
MGP_CBAJ_T0055644	-	7579	-	MGP_CBAJ_P0055644	513 (aa)	-	-
MGP_CBAJ_T0055646	-	489	-	-	- (aa)	-	-
MGP_CBAJ_T0055641	-	478	-	-	- (aa)	-	-
MGP_CBAJ_T0055640	-	426	-	-	- (aa)	-	-
MGP_CBAJ_T0055643	-	271	-	-	- (aa)	-	-
MGP_CBAJ_T0055642	-	7008	-	MGP_CBAJ_P0055642	543 (aa)	-	-
MGP_CBAJ_T0055638	-	350	-	-	- (aa)	-	-
MGP_CBAJ_T0055639	-	7851	-	MGP_CBAJ_P0055639	487 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0025836	Celf1	57	37.879	MGP_CBAJ_G0026882	Pabpc4l	65	34.211
MGP_CBAJ_G0025836	Celf1	100	45.200	MGP_CBAJ_G0023910	Celf4	100	42.430
MGP_CBAJ_G0025836	Celf1	69	41.975	MGP_CBAJ_G0028108	Elavl2	85	41.975
MGP_CBAJ_G0025836	Celf1	70	38.636	MGP_CBAJ_G0028401	Pabpc4	68	33.333
MGP_CBAJ_G0025836	Celf1	57	43.590	MGP_CBAJ_G0034128	Elavl3	71	42.391
MGP_CBAJ_G0025836	Celf1	53	43.421	MGP_CBAJ_G0035052	Rbms3	68	43.421
MGP_CBAJ_G0025836	Celf1	100	80.082	MGP_CBAJ_G0025044	Celf2	100	88.060
MGP_CBAJ_G0025836	Celf1	62	40.741	MGP_CBAJ_G0028241	Elavl4	78	40.741
MGP_CBAJ_G0025836	Celf1	98	45.135	MGP_CBAJ_G0034556	Celf6	91	45.549
MGP_CBAJ_G0025836	Celf1	61	45.679	MGP_CBAJ_G0033001	Elavl1	83	45.679
MGP_CBAJ_G0025836	Celf1	97	43.320	MGP_CBAJ_G0027235	Celf3	99	43.830
MGP_CBAJ_G0025836	Celf1	52	35.526	MGP_CBAJ_G0022842	Pabpc6	53	35.526