EuRBPDB

Description

Ensembl ID: MGP_CBAJ_G0025906 (Gene tree)
Gene ID: -
Gene Symbol: Caprin1
Alias: AL022980|Caprin-1|Gpiap|Gpiap1|Gpip137|M11s1|MMGPIP137|Mmgpip137|P137|RNG105|Rng105|caprin-1|rng105
Full Name: cell cycle associated protein 1
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 34213 bases
Position: chr2:113020134-113054346
Accession: 1858234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0056076	Caprin-1_C	PF12287.8	1.8e-136	1	1
MGP_CBAJ_P0056077	Caprin-1_C	PF12287.8	1.8e-136	1	1
MGP_CBAJ_P0056078	Caprin-1_C	PF12287.8	3.2e-90	1	1
MGP_CBAJ_P0056083	Caprin-1_C	PF12287.8	2.8e-25	1	1
MGP_CBAJ_P0056079	Caprin-1_C	PF12287.8	3.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0056088	-	828	-	-	- (aa)	-	-
MGP_CBAJ_T0056078	-	1923	-	MGP_CBAJ_P0056078	213 (aa)	-	-
MGP_CBAJ_T0056077	-	4067	-	MGP_CBAJ_P0056077	707 (aa)	-	-
MGP_CBAJ_T0056076	-	6167	XM_006499902	MGP_CBAJ_P0056076	707 (aa)	XP_006499965	Q60865
MGP_CBAJ_T0056082	-	809	-	-	- (aa)	-	-
MGP_CBAJ_T0056083	-	760	-	MGP_CBAJ_P0056083	253 (aa)	-	-
MGP_CBAJ_T0056079	-	856	-	MGP_CBAJ_P0056079	93 (aa)	-	-
MGP_CBAJ_T0056081	-	937	-	-	- (aa)	-	-
MGP_CBAJ_T0056086	-	879	-	-	- (aa)	-	-
MGP_CBAJ_T0056087	-	555	-	-	- (aa)	-	-
MGP_CBAJ_T0056084	-	570	-	-	- (aa)	-	-
MGP_CBAJ_T0056085	-	476	-	-	- (aa)	-	-
MGP_CBAJ_T0056089	-	391	-	-	- (aa)	-	-
MGP_CBAJ_T0056090	-	626	-	-	- (aa)	-	-
MGP_CBAJ_T0056080	-	816	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0025906	Caprin1	89	44.275	MGP_CBAJ_G0031169	Caprin2	91	38.415