EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0026152 (Gene tree)
Gene ID: -
Gene Symbol: Ciao1
Alias: AW210570|Wdr39
Full Name: cytosolic iron-sulfur protein assembly 1
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 6862 bases
Position: chr2:139603231-139610092
Accession: 1346998
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0057109	eIF2A	PF08662.11	0.00029	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0057108	-	581	-	-	- (aa)	-	-
MGP_CBAJ_T0057109	-	531	-	MGP_CBAJ_P0057109	176 (aa)	-	-
MGP_CBAJ_T0057110	-	409	-	MGP_CBAJ_P0057110	51 (aa)	-	-
MGP_CBAJ_T0057106	-	3079	-	MGP_CBAJ_P0057106	339 (aa)	-	Q99KN2
MGP_CBAJ_T0057107	-	1115	-	MGP_CBAJ_P0057107	233 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0026152's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0026152's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0026152	Ciao1	85	34.058	MGP_CBAJ_G0022478	Wdr5b	85	34.058
MGP_CBAJ_G0026152	Ciao1	91	36.735	MGP_CBAJ_G0025227	Wdr5	90	36.735
MGP_CBAJ_G0026152	Ciao1	85	36.364	MGP_CBAJ_G0034878	Poc1a	80	36.364
MGP_CBAJ_G0026152	Ciao1	84	32.331	MGP_CBAJ_G0023017	Tbl3	55	30.714