EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0026273 (Gene tree)
Gene ID: -
Gene Symbol: Snrpb2
Alias: 2810052G09Rik
Full Name: U2 small nuclear ribonucleoprotein B
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 9806 bases
Position: chr2:157046747-157056552
Accession: 104805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0057629	RRM_5	PF13893.6	8.4e-07	1	2
MGP_CBAJ_P0057629	RRM_5	PF13893.6	8.4e-07	2	2
MGP_CBAJ_P0057629	RRM_1	PF00076.22	2.9e-25	1	2
MGP_CBAJ_P0057629	RRM_1	PF00076.22	2.9e-25	2	2
MGP_CBAJ_P0057631	RRM_1	PF00076.22	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0057629	-	2061	-	MGP_CBAJ_P0057629	225 (aa)	-	Q9CQI7
MGP_CBAJ_T0057632	-	594	-	-	- (aa)	-	-
MGP_CBAJ_T0057630	-	686	-	-	- (aa)	-	-
MGP_CBAJ_T0057631	-	636	-	MGP_CBAJ_P0057631	143 (aa)	-	-
MGP_CBAJ_T0057633	-	1827	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0026273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0026273's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0026273	Snrpb2	99	53.430	MGP_CBAJ_G0034835	Gm5145	99	52.347
MGP_CBAJ_G0026273	Snrpb2	99	63.121	MGP_CBAJ_G0031572	Snrpa	97	55.235