EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0026601 (Gene tree)
Gene ID: -
Gene Symbol: Ddx27
Alias: C86129
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 24724 bases
Position: chr2:184251100-184275823
Accession: 2385884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0059009	ResIII	PF04851.15	1.6e-06	1	1
MGP_CBAJ_P0059009	DEAD	PF00270.29	7.1e-45	1	1
MGP_CBAJ_P0059010	DEAD	PF00270.29	2.4e-18	1	1
MGP_CBAJ_P0059011	DEAD	PF00270.29	6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0059014	-	708	-	-	- (aa)	-	-
MGP_CBAJ_T0059010	-	2151	-	MGP_CBAJ_P0059010	292 (aa)	-	-
MGP_CBAJ_T0059011	-	955	-	MGP_CBAJ_P0059011	310 (aa)	-	-
MGP_CBAJ_T0059012	-	264	-	-	- (aa)	-	-
MGP_CBAJ_T0059013	-	649	-	-	- (aa)	-	-
MGP_CBAJ_T0059009	-	2714	XM_006499422	MGP_CBAJ_P0059009	760 (aa)	XP_006499485	Q921N6

Gene Model

Click here to download MGP_CBAJ_G0026601's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0026601's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0026601	Ddx27	53	31.019	MGP_CBAJ_G0017747	Ddx56	98	33.065
MGP_CBAJ_G0026601	Ddx27	59	33.696	MGP_CBAJ_G0033366	Ddx49	97	38.177
MGP_CBAJ_G0026601	Ddx27	52	34.129	MGP_CBAJ_G0017036	Ddx50	56	34.272
MGP_CBAJ_G0026601	Ddx27	56	32.558	MGP_CBAJ_G0021780	Ddx17	56	33.880
MGP_CBAJ_G0026601	Ddx27	53	38.221	MGP_CBAJ_G0016154	Ddx18	61	38.462
MGP_CBAJ_G0026601	Ddx27	51	35.938	MGP_CBAJ_G0019765	Ddx24	56	35.938
MGP_CBAJ_G0026601	Ddx27	54	31.655	MGP_CBAJ_G0023338	Ddx39b	84	32.970