EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0026713 (Gene tree)
Gene ID: -
Gene Symbol: Arfrp1
Alias: 1500006I01Rik|AI480700
Full Name: ADP-ribosylation factor related protein 1
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 9646 bases
Position: chr2:200381698-200391343
Accession: 1923938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0059478	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0059478	-	2306	XM_011239965	MGP_CBAJ_P0059478	201 (aa)	XP_011238267	Q8BXL7
MGP_CBAJ_T0059479	-	2318	-	MGP_CBAJ_P0059479	121 (aa)	-	-
MGP_CBAJ_T0059487	-	555	-	-	- (aa)	-	-
MGP_CBAJ_T0059486	-	434	-	-	- (aa)	-	-
MGP_CBAJ_T0059485	-	662	-	MGP_CBAJ_P0059485	62 (aa)	-	-
MGP_CBAJ_T0059484	-	748	-	-	- (aa)	-	-
MGP_CBAJ_T0059483	-	835	-	-	- (aa)	-	-
MGP_CBAJ_T0059482	-	1087	-	-	- (aa)	-	-
MGP_CBAJ_T0059481	-	1822	-	-	- (aa)	-	-
MGP_CBAJ_T0059480	-	2179	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0026713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0026713's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0026713	Arfrp1	93	33.929	MGP_CBAJ_G0022635	Arl6	92	30.387
MGP_CBAJ_G0026713	Arfrp1	93	38.938	MGP_CBAJ_G0025446	Arl5a	97	38.587
MGP_CBAJ_G0026713	Arfrp1	85	34.286	MGP_CBAJ_G0016030	Arl4c	86	34.286
MGP_CBAJ_G0026713	Arfrp1	87	35.185	MGP_CBAJ_G0029638	Rab35	59	32.576
MGP_CBAJ_G0026713	Arfrp1	93	40.708	MGP_CBAJ_G0018772	Arl5c	96	37.705
MGP_CBAJ_G0026713	Arfrp1	93	38.793	MGP_CBAJ_G0018120	Arf1	96	33.871
MGP_CBAJ_G0026713	Arfrp1	92	40.000	MGP_CBAJ_G0024922	Arl3	96	40.000
MGP_CBAJ_G0026713	Arfrp1	93	38.793	MGP_CBAJ_G0018991	Arf2	96	33.333
MGP_CBAJ_G0026713	Arfrp1	91	38.182	MGP_CBAJ_G0024457	Arl2	97	35.106
MGP_CBAJ_G0026713	Arfrp1	71	30.070	MGP_CBAJ_G0016259	Arl8a	73	30.070
MGP_CBAJ_G0026713	Arfrp1	84	35.577	MGP_CBAJ_G0026986	Arl14	83	34.911
MGP_CBAJ_G0026713	Arfrp1	87	32.222	MGP_CBAJ_G0018930	Arl4d	85	32.222
MGP_CBAJ_G0026713	Arfrp1	91	40.000	MGP_CBAJ_G0019419	Arl4a	90	34.896
MGP_CBAJ_G0026713	Arfrp1	84	40.196	MGP_CBAJ_G0025078	Arl5b	92	37.126
MGP_CBAJ_G0026713	Arfrp1	90	38.393	MGP_CBAJ_G0030182	Arf5	94	34.225
MGP_CBAJ_G0026713	Arfrp1	85	36.416	MGP_CBAJ_G0017365	Arl1	97	34.921
MGP_CBAJ_G0026713	Arfrp1	93	37.931	MGP_CBAJ_G0022011	Arf3	96	33.333
MGP_CBAJ_G0026713	Arfrp1	87	37.273	MGP_CBAJ_G0021148	Arl11	94	34.659
MGP_CBAJ_G0026713	Arfrp1	93	31.304	MGP_CBAJ_G0030768	Arl8b	74	31.724