EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0060077	KH_1	PF00013.29	9e-17	1	2
MGP_CBAJ_P0060077	KH_1	PF00013.29	9e-17	2	2
MGP_CBAJ_P0060076	KH_1	PF00013.29	9.2e-17	1	2
MGP_CBAJ_P0060076	KH_1	PF00013.29	9.2e-17	2	2
MGP_CBAJ_P0060074	KH_1	PF00013.29	1.1e-16	1	2
MGP_CBAJ_P0060074	KH_1	PF00013.29	1.1e-16	2	2
MGP_CBAJ_P0060075	KH_1	PF00013.29	1.3e-16	1	2
MGP_CBAJ_P0060075	KH_1	PF00013.29	1.3e-16	2	2
MGP_CBAJ_P0060072	KH_1	PF00013.29	1.7e-16	1	2
MGP_CBAJ_P0060072	KH_1	PF00013.29	1.7e-16	2	2
MGP_CBAJ_P0060077	Agenet	PF05641.12	4.1e-15	1	2
MGP_CBAJ_P0060077	Agenet	PF05641.12	4.1e-15	2	2
MGP_CBAJ_P0060076	Agenet	PF05641.12	4.2e-15	1	2
MGP_CBAJ_P0060076	Agenet	PF05641.12	4.2e-15	2	2
MGP_CBAJ_P0060074	Agenet	PF05641.12	4.9e-15	1	2
MGP_CBAJ_P0060074	Agenet	PF05641.12	4.9e-15	2	2
MGP_CBAJ_P0060075	Agenet	PF05641.12	6.4e-15	1	2
MGP_CBAJ_P0060075	Agenet	PF05641.12	6.4e-15	2	2
MGP_CBAJ_P0060072	Agenet	PF05641.12	8e-15	1	2
MGP_CBAJ_P0060072	Agenet	PF05641.12	8e-15	2	2
MGP_CBAJ_P0060074	FXMRP1_C_core	PF12235.8	3e-46	1	1
MGP_CBAJ_P0060072	FXMRP1_C_core	PF12235.8	4.1e-46	1	1
MGP_CBAJ_P0060077	FXMRP1_C_core	PF12235.8	8.5e-29	1	2
MGP_CBAJ_P0060077	FXMRP1_C_core	PF12235.8	8.5e-29	2	2
MGP_CBAJ_P0060076	FXMRP1_C_core	PF12235.8	8.6e-29	1	2
MGP_CBAJ_P0060076	FXMRP1_C_core	PF12235.8	8.6e-29	2	2
MGP_CBAJ_P0060075	FXMRP1_C_core	PF12235.8	5.2e-28	1	2
MGP_CBAJ_P0060075	FXMRP1_C_core	PF12235.8	5.2e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0060078	-	651	-	-	- (aa)	-	-
MGP_CBAJ_T0060079	-	646	-	MGP_CBAJ_P0060079	132 (aa)	-	-
MGP_CBAJ_T0060076	-	3014	-	MGP_CBAJ_P0060076	539 (aa)	-	-
MGP_CBAJ_T0060077	-	1611	-	MGP_CBAJ_P0060077	536 (aa)	-	-
MGP_CBAJ_T0060074	-	2127	-	MGP_CBAJ_P0060074	568 (aa)	-	-
MGP_CBAJ_T0060075	-	2129	-	MGP_CBAJ_P0060075	621 (aa)	-	-
MGP_CBAJ_T0060072	-	2459	XM_006535400	MGP_CBAJ_P0060072	677 (aa)	XP_006535463	Q61584
MGP_CBAJ_T0060073	-	2158	-	MGP_CBAJ_P0060073	54 (aa)	-	-
MGP_CBAJ_T0060080	-	2488	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0026840	Fxr1	81	73.653	MGP_CBAJ_G0035419	Fmr1	85	65.613
MGP_CBAJ_G0026840	Fxr1	99	66.490	MGP_CBAJ_G0018268	Fxr2	98	62.737