EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0027021 (Gene tree)
Gene ID: -
Gene Symbol: Rbm46
Alias: EG633285|ENSMUSG00000033882|Gm761|LOC329687
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 42775 bases
Position: chr3:88679921-88722695
Accession: 3645057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0060951	DND1_DSRM	PF14709.7	1.9e-27	1	1
MGP_CBAJ_P0060952	DND1_DSRM	PF14709.7	2.1e-27	1	1
MGP_CBAJ_P0060950	DND1_DSRM	PF14709.7	2.5e-27	1	1
MGP_CBAJ_P0060951	RRM_1	PF00076.22	8.8e-37	1	3
MGP_CBAJ_P0060951	RRM_1	PF00076.22	8.8e-37	2	3
MGP_CBAJ_P0060951	RRM_1	PF00076.22	8.8e-37	3	3
MGP_CBAJ_P0060952	RRM_1	PF00076.22	1e-36	1	3
MGP_CBAJ_P0060952	RRM_1	PF00076.22	1e-36	2	3
MGP_CBAJ_P0060952	RRM_1	PF00076.22	1e-36	3	3
MGP_CBAJ_P0060950	RRM_1	PF00076.22	1.5e-36	1	3
MGP_CBAJ_P0060950	RRM_1	PF00076.22	1.5e-36	2	3
MGP_CBAJ_P0060950	RRM_1	PF00076.22	1.5e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0060951	-	2058	-	MGP_CBAJ_P0060951	470 (aa)	-	-
MGP_CBAJ_T0060950	-	1794	XM_006501849	MGP_CBAJ_P0060950	533 (aa)	XP_006501912	P86049
MGP_CBAJ_T0060952	-	2115	-	MGP_CBAJ_P0060952	485 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0027021's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0027021's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0027021	Rbm46	65	56.774	MGP_CBAJ_G0028627	Hnrnpr	59	56.329
MGP_CBAJ_G0027021	Rbm46	66	72.468	MGP_CBAJ_G0029256	Rbm47	94	73.649
MGP_CBAJ_G0027021	Rbm46	63	55.000	MGP_CBAJ_G0034763	Syncrip	53	54.333
MGP_CBAJ_G0027021	Rbm46	88	70.064	MGP_CBAJ_G0024747	A1cf	96	70.064
MGP_CBAJ_G0027021	Rbm46	52	30.000	MGP_CBAJ_G0032753	Tial1	73	32.000