EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0027235 (Gene tree)
Gene ID: -
Gene Symbol: Celf3
Alias: 4930415M08Rik|BRUNOL1|CAGH4|ERDA4|Tnrc4
Full Name: CUGBP%2C Elav-like family member 3
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 13755 bases
Position: chr3:102144331-102158085
Accession: 1926034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0061834	RRM_1	PF00076.22	9.2e-54	1	3
MGP_CBAJ_P0061834	RRM_1	PF00076.22	9.2e-54	2	3
MGP_CBAJ_P0061834	RRM_1	PF00076.22	9.2e-54	3	3
MGP_CBAJ_P0061833	RRM_1	PF00076.22	1.5e-53	1	3
MGP_CBAJ_P0061833	RRM_1	PF00076.22	1.5e-53	2	3
MGP_CBAJ_P0061833	RRM_1	PF00076.22	1.5e-53	3	3
MGP_CBAJ_P0061835	RRM_1	PF00076.22	2e-53	1	3
MGP_CBAJ_P0061835	RRM_1	PF00076.22	2e-53	2	3
MGP_CBAJ_P0061835	RRM_1	PF00076.22	2e-53	3	3
MGP_CBAJ_P0061840	RRM_1	PF00076.22	6.9e-16	1	1
MGP_CBAJ_P0061841	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0061844	-	855	-	-	- (aa)	-	-
MGP_CBAJ_T0061840	-	779	-	MGP_CBAJ_P0061840	182 (aa)	-	-
MGP_CBAJ_T0061841	-	726	-	MGP_CBAJ_P0061841	231 (aa)	-	-
MGP_CBAJ_T0061842	-	3380	-	-	- (aa)	-	-
MGP_CBAJ_T0061843	-	889	-	-	- (aa)	-	-
MGP_CBAJ_T0061833	-	2749	-	MGP_CBAJ_P0061833	465 (aa)	-	-
MGP_CBAJ_T0061832	-	309	XM_006502323	MGP_CBAJ_P0061832	31 (aa)	XP_006502386	Q8CIN6
MGP_CBAJ_T0061835	-	1485	-	MGP_CBAJ_P0061835	494 (aa)	-	-
MGP_CBAJ_T0061834	-	2356	-	MGP_CBAJ_P0061834	416 (aa)	-	-
MGP_CBAJ_T0061837	-	669	-	-	- (aa)	-	-
MGP_CBAJ_T0061836	-	1193	-	-	- (aa)	-	-
MGP_CBAJ_T0061839	-	2937	-	-	- (aa)	-	-
MGP_CBAJ_T0061838	-	2446	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0027235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0027235's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0027235	Celf3	67	32.857	MGP_CBAJ_G0026528	Pabpc1l	57	34.118
MGP_CBAJ_G0027235	Celf3	77	37.805	MGP_CBAJ_G0030638	Tia1	93	38.667
MGP_CBAJ_G0027235	Celf3	70	34.091	MGP_CBAJ_G0032753	Tial1	81	37.333
MGP_CBAJ_G0027235	Celf3	91	39.474	MGP_CBAJ_G0035052	Rbms3	76	39.474
MGP_CBAJ_G0027235	Celf3	98	35.632	MGP_CBAJ_G0034128	Elavl3	89	34.940
MGP_CBAJ_G0027235	Celf3	61	40.741	MGP_CBAJ_G0028241	Elavl4	85	40.741
MGP_CBAJ_G0027235	Celf3	63	41.975	MGP_CBAJ_G0028108	Elavl2	76	41.975
MGP_CBAJ_G0027235	Celf3	81	87.368	MGP_CBAJ_G0034556	Celf6	75	85.526
MGP_CBAJ_G0027235	Celf3	98	35.632	MGP_CBAJ_G0033001	Elavl1	95	44.444
MGP_CBAJ_G0027235	Celf3	100	67.213	MGP_CBAJ_G0017295	Celf5	89	63.920
MGP_CBAJ_G0027235	Celf3	100	69.072	MGP_CBAJ_G0023910	Celf4	100	63.275
MGP_CBAJ_G0027235	Celf3	80	37.500	MGP_CBAJ_G0022842	Pabpc6	72	36.585
MGP_CBAJ_G0027235	Celf3	99	43.830	MGP_CBAJ_G0025836	Celf1	97	43.320
MGP_CBAJ_G0027235	Celf3	90	55.801	MGP_CBAJ_G0025044	Celf2	94	83.333
MGP_CBAJ_G0027235	Celf3	69	33.784	MGP_CBAJ_G0028401	Pabpc4	67	32.394