EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0027559 (Gene tree)
Gene ID: -
Gene Symbol: Rpl34
Alias: 1100001I22Rik|EG619547|ENSMUSG00000068396|Gm10239
Full Name: ribosomal protein L34
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 3568 bases
Position: chr3:142843568-142847135
Accession: 1915686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0063389	Ribosomal_L34e	PF01199.18	1.6e-42	1	1
MGP_CBAJ_P0063391	Ribosomal_L34e	PF01199.18	1.6e-42	1	1
MGP_CBAJ_P0063393	Ribosomal_L34e	PF01199.18	1.6e-42	1	1
MGP_CBAJ_P0063394	Ribosomal_L34e	PF01199.18	7.6e-39	1	1
MGP_CBAJ_P0063396	Ribosomal_L34e	PF01199.18	3.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0063389	-	624	-	MGP_CBAJ_P0063389	117 (aa)	XP_001481222	Q9D1R9
MGP_CBAJ_T0063392	-	477	-	-	- (aa)	-	-
MGP_CBAJ_T0063393	-	495	-	MGP_CBAJ_P0063393	117 (aa)	-	-
MGP_CBAJ_T0063390	-	573	-	-	- (aa)	-	-
MGP_CBAJ_T0063391	-	480	-	MGP_CBAJ_P0063391	117 (aa)	-	-
MGP_CBAJ_T0063396	-	1232	-	MGP_CBAJ_P0063396	59 (aa)	-	-
MGP_CBAJ_T0063394	-	711	-	MGP_CBAJ_P0063394	90 (aa)	-	-
MGP_CBAJ_T0063395	-	766	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0027559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0027559's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0027559	Rpl34	100	88.136	MGP_CBAJ_G0020783	Gm2178	100	82.203