EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CBAJ_G0027811 (Gene tree)
Gene ID
-
Gene Symbol
Ddx58
Alias
6430573D20Rik|C330021E21|RIG-I|RLR-1
Full Name
DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
Gene Type
protein_coding
Species
Mus_musculus_cbaj
Status
putative
Strand
Minus strand
Length
36372 bases
Position
chr4:40828570-40864941
Accession
2442858
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CBAJ_P0064640ResIIIPF04851.153.2e-1711
MGP_CBAJ_P0064637ResIIIPF04851.155.4e-1711
MGP_CBAJ_P0064637RIG-I_C-RDPF11648.84.8e-3511
MGP_CBAJ_P0064640DEADPF00270.291.3e-1611
MGP_CBAJ_P0064637DEADPF00270.292.8e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CBAJ_T0064638-421--- (aa)--
MGP_CBAJ_T0064639-756--- (aa)--
MGP_CBAJ_T0064635-386--- (aa)--
MGP_CBAJ_T0064636-3533--- (aa)--
MGP_CBAJ_T0064637-3874-MGP_CBAJ_P0064637926 (aa)--
MGP_CBAJ_T0064641-1641--- (aa)--
MGP_CBAJ_T0064640-2127-MGP_CBAJ_P0064640707 (aa)--
MGP_CBAJ_T0064643-541--- (aa)--
MGP_CBAJ_T0064642-1250--- (aa)--
MGP_CBAJ_T0064644-1607--- (aa)--
Gene Model
Click here to download MGP_CBAJ_G0027811's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0027811's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CBAJ_G0027811Ddx587235.010MGP_CBAJ_G0018884Dhx589732.468
MGP_CBAJ_G0027811Ddx589830.691MGP_CBAJ_G0025484Ifih19730.691

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us