EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0028108 (Gene tree)
Gene ID: -
Gene Symbol: Elavl2
Alias: Hub|mel-N1
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 2 (Hu antigen B)
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 165704 bases
Position: chr4:97598628-97764331
Accession: 1100887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0065897	RRM_5	PF13893.6	1.3e-12	1	2
MGP_CBAJ_P0065897	RRM_5	PF13893.6	1.3e-12	2	2
MGP_CBAJ_P0065898	RRM_5	PF13893.6	1.4e-12	1	2
MGP_CBAJ_P0065898	RRM_5	PF13893.6	1.4e-12	2	2
MGP_CBAJ_P0065899	RRM_5	PF13893.6	1.7e-12	1	2
MGP_CBAJ_P0065899	RRM_5	PF13893.6	1.7e-12	2	2
MGP_CBAJ_P0065896	RRM_5	PF13893.6	1.9e-12	1	2
MGP_CBAJ_P0065896	RRM_5	PF13893.6	1.9e-12	2	2
MGP_CBAJ_P0065901	RRM_5	PF13893.6	2.1e-12	1	2
MGP_CBAJ_P0065901	RRM_5	PF13893.6	2.1e-12	2	2
MGP_CBAJ_P0065902	RRM_5	PF13893.6	2.2e-12	1	2
MGP_CBAJ_P0065902	RRM_5	PF13893.6	2.2e-12	2	2
MGP_CBAJ_P0065897	RRM_1	PF00076.22	1.2e-66	1	3
MGP_CBAJ_P0065897	RRM_1	PF00076.22	1.2e-66	2	3
MGP_CBAJ_P0065897	RRM_1	PF00076.22	1.2e-66	3	3
MGP_CBAJ_P0065898	RRM_1	PF00076.22	1.4e-66	1	3
MGP_CBAJ_P0065898	RRM_1	PF00076.22	1.4e-66	2	3
MGP_CBAJ_P0065898	RRM_1	PF00076.22	1.4e-66	3	3
MGP_CBAJ_P0065899	RRM_1	PF00076.22	1.6e-66	1	3
MGP_CBAJ_P0065899	RRM_1	PF00076.22	1.6e-66	2	3
MGP_CBAJ_P0065899	RRM_1	PF00076.22	1.6e-66	3	3
MGP_CBAJ_P0065896	RRM_1	PF00076.22	1.7e-66	1	3
MGP_CBAJ_P0065896	RRM_1	PF00076.22	1.7e-66	2	3
MGP_CBAJ_P0065896	RRM_1	PF00076.22	1.7e-66	3	3
MGP_CBAJ_P0065902	RRM_1	PF00076.22	2e-66	1	3
MGP_CBAJ_P0065902	RRM_1	PF00076.22	2e-66	2	3
MGP_CBAJ_P0065902	RRM_1	PF00076.22	2e-66	3	3
MGP_CBAJ_P0065901	RRM_1	PF00076.22	2e-66	1	3
MGP_CBAJ_P0065901	RRM_1	PF00076.22	2e-66	2	3
MGP_CBAJ_P0065901	RRM_1	PF00076.22	2e-66	3	3
MGP_CBAJ_P0065904	RRM_1	PF00076.22	7.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0065899	-	3840	-	MGP_CBAJ_P0065899	373 (aa)	-	-
MGP_CBAJ_T0065898	-	3730	-	MGP_CBAJ_P0065898	360 (aa)	-	-
MGP_CBAJ_T0065908	-	415	-	-	- (aa)	-	-
MGP_CBAJ_T0065905	-	408	-	MGP_CBAJ_P0065905	83 (aa)	-	-
MGP_CBAJ_T0065897	-	3671	-	MGP_CBAJ_P0065897	347 (aa)	-	-
MGP_CBAJ_T0065907	-	450	-	-	- (aa)	-	-
MGP_CBAJ_T0065906	-	511	-	MGP_CBAJ_P0065906	23 (aa)	-	-
MGP_CBAJ_T0065901	-	1282	-	MGP_CBAJ_P0065901	389 (aa)	-	-
MGP_CBAJ_T0065896	-	3797	XM_006502778	MGP_CBAJ_P0065896	376 (aa)	XP_006502841	Q60899
MGP_CBAJ_T0065903	-	3195	-	-	- (aa)	-	-
MGP_CBAJ_T0065900	-	930	-	-	- (aa)	-	-
MGP_CBAJ_T0065904	-	425	-	MGP_CBAJ_P0065904	125 (aa)	-	-
MGP_CBAJ_T0065902	-	1167	-	MGP_CBAJ_P0065902	388 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0028108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0028108's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0028108	Elavl2	90	37.349	MGP_CBAJ_G0022842	Pabpc6	60	37.349
MGP_CBAJ_G0028108	Elavl2	100	79.292	MGP_CBAJ_G0034128	Elavl3	100	78.400
MGP_CBAJ_G0028108	Elavl2	100	89.751	MGP_CBAJ_G0028241	Elavl4	99	89.315
MGP_CBAJ_G0028108	Elavl2	83	39.506	MGP_CBAJ_G0025044	Celf2	87	33.333
MGP_CBAJ_G0028108	Elavl2	89	37.349	MGP_CBAJ_G0021507	-	57	37.349
MGP_CBAJ_G0028108	Elavl2	89	76.375	MGP_CBAJ_G0033001	Elavl1	94	76.375
MGP_CBAJ_G0028108	Elavl2	89	36.145	MGP_CBAJ_G0024072	Pabpc2	59	36.145
MGP_CBAJ_G0028108	Elavl2	58	31.169	MGP_CBAJ_G0029449	Hnrnpd	70	32.000
MGP_CBAJ_G0028108	Elavl2	96	34.615	MGP_CBAJ_G0030638	Tia1	89	34.615
MGP_CBAJ_G0028108	Elavl2	66	30.952	MGP_CBAJ_G0028530	Trnau1ap	98	30.952
MGP_CBAJ_G0028108	Elavl2	64	37.500	MGP_CBAJ_G0017221	Cirbp	76	37.500
MGP_CBAJ_G0028108	Elavl2	89	37.037	MGP_CBAJ_G0035698	Pabpc5	94	37.037
MGP_CBAJ_G0028108	Elavl2	89	34.940	MGP_CBAJ_G0026882	Pabpc4l	96	34.940
MGP_CBAJ_G0028108	Elavl2	85	41.975	MGP_CBAJ_G0025836	Celf1	69	41.975
MGP_CBAJ_G0028108	Elavl2	72	32.632	MGP_CBAJ_G0018650	Msi2	70	31.250
MGP_CBAJ_G0028108	Elavl2	69	34.524	MGP_CBAJ_G0033470	-	59	34.831
MGP_CBAJ_G0028108	Elavl2	60	41.558	MGP_CBAJ_G0025476	Rbms1	51	37.209
MGP_CBAJ_G0028108	Elavl2	92	34.940	MGP_CBAJ_G0026528	Pabpc1l	64	34.940
MGP_CBAJ_G0028108	Elavl2	93	34.615	MGP_CBAJ_G0032753	Tial1	72	34.615
MGP_CBAJ_G0028108	Elavl2	78	40.741	MGP_CBAJ_G0034556	Celf6	89	37.037
MGP_CBAJ_G0028108	Elavl2	63	32.911	MGP_CBAJ_G0035193	Rbm3	82	38.710
MGP_CBAJ_G0028108	Elavl2	76	41.975	MGP_CBAJ_G0027235	Celf3	63	41.975
MGP_CBAJ_G0028108	Elavl2	69	37.209	MGP_CBAJ_G0035052	Rbms3	83	37.222
MGP_CBAJ_G0028108	Elavl2	89	34.940	MGP_CBAJ_G0028401	Pabpc4	98	35.294
MGP_CBAJ_G0028108	Elavl2	88	39.506	MGP_CBAJ_G0023910	Celf4	91	37.037
MGP_CBAJ_G0028108	Elavl2	67	35.714	MGP_CBAJ_G0029760	Snrnp35	60	37.500
MGP_CBAJ_G0028108	Elavl2	73	34.831	MGP_CBAJ_G0035395	Rbmx	86	34.831
MGP_CBAJ_G0028108	Elavl2	59	33.784	MGP_CBAJ_G0027303	Rbm8a	58	32.353