EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0028220 (Gene tree)
Gene ID: -
Gene Symbol: Zcchc11
Alias: 6030404K05Rik|9230115F04Rik|Kiaa0191|PPAPD3|Tut4|mKIAA0191
Full Name: zinc finger%2C CCHC domain containing 11
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 105663 bases
Position: chr4:116846493-116952155
Accession: 2445126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0066431	zf-CCHC	PF00098.23	7.9e-11	1	2
MGP_CBAJ_P0066431	zf-CCHC	PF00098.23	7.9e-11	2	2
MGP_CBAJ_P0066432	zf-CCHC	PF00098.23	8e-11	1	2
MGP_CBAJ_P0066432	zf-CCHC	PF00098.23	8e-11	2	2
MGP_CBAJ_P0066431	PAP_assoc	PF03828.19	3.4e-28	1	2
MGP_CBAJ_P0066431	PAP_assoc	PF03828.19	3.4e-28	2	2
MGP_CBAJ_P0066432	PAP_assoc	PF03828.19	3.8e-28	1	2
MGP_CBAJ_P0066432	PAP_assoc	PF03828.19	3.8e-28	2	2
MGP_CBAJ_P0066433	PAP_assoc	PF03828.19	4.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0066430	-	679	XM_006502978	MGP_CBAJ_P0066430	63 (aa)	XP_006503041	B2RX14
MGP_CBAJ_T0066431	-	6054	-	MGP_CBAJ_P0066431	1644 (aa)	-	-
MGP_CBAJ_T0066432	-	5865	-	MGP_CBAJ_P0066432	1648 (aa)	-	-
MGP_CBAJ_T0066433	-	3283	-	MGP_CBAJ_P0066433	1006 (aa)	-	-
MGP_CBAJ_T0066434	-	636	-	-	- (aa)	-	-
MGP_CBAJ_T0066435	-	541	-	-	- (aa)	-	-
MGP_CBAJ_T0066436	-	567	-	-	- (aa)	-	-
MGP_CBAJ_T0066437	-	591	-	-	- (aa)	-	-
MGP_CBAJ_T0066438	-	484	-	-	- (aa)	-	-
MGP_CBAJ_T0066439	-	2472	-	-	- (aa)	-	-
MGP_CBAJ_T0066440	-	587	-	MGP_CBAJ_P0066440	105 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0028220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0028220's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0028220	Zcchc11	59	58.396	MGP_CBAJ_G0020353	Zcchc6	63	67.209