EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0028281 (Gene tree)
Gene ID: -
Gene Symbol: Rad54l
Alias: RAD54|Rad54
Full Name: RAD54 like (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 31374 bases
Position: chr4:124794674-124826047
Accession: 894697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0066718	ResIII	PF04851.15	2.2e-09	1	1
MGP_CBAJ_P0066719	ResIII	PF04851.15	2.2e-09	1	1
MGP_CBAJ_P0066718	DEAD	PF00270.29	9e-07	1	1
MGP_CBAJ_P0066719	DEAD	PF00270.29	9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0066720	-	654	-	-	- (aa)	-	-
MGP_CBAJ_T0066717	-	4571	-	-	- (aa)	-	-
MGP_CBAJ_T0066721	-	209	-	-	- (aa)	-	-
MGP_CBAJ_T0066719	-	3025	-	MGP_CBAJ_P0066719	747 (aa)	-	-
MGP_CBAJ_T0066718	-	2780	-	MGP_CBAJ_P0066718	747 (aa)	-	-
MGP_CBAJ_T0066722	-	1515	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0028281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0028281's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0028281	Rad54l	66	33.267	MGP_CBAJ_G0035331	Smarca1	61	32.031
MGP_CBAJ_G0028281	Rad54l	66	30.785	MGP_CBAJ_G0027320	Chd1l	50	30.584
MGP_CBAJ_G0028281	Rad54l	66	30.112	MGP_CBAJ_G0030494	Smarcad1	50	30.112
MGP_CBAJ_G0028281	Rad54l	88	44.748	MGP_CBAJ_G0027728	Rad54b	76	44.748