EuRBPDB

Description

Ensembl ID: MGP_CBAJ_G0028452 (Gene tree)
Gene ID: -
Gene Symbol: Sfpq
Alias: 1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|OTTMUSG00000009329|PSF|Psf|REP1
Full Name: splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 18529 bases
Position: chr4:136878672-136897200
Accession: 1918764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0067449	RRM_1	PF00076.22	5.9e-30	1	2
MGP_CBAJ_P0067449	RRM_1	PF00076.22	5.9e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0067449	-	3465	-	MGP_CBAJ_P0067449	699 (aa)	-	Q8VIJ6
MGP_CBAJ_T0067454	-	644	-	-	- (aa)	-	-
MGP_CBAJ_T0067451	-	925	-	-	- (aa)	-	-
MGP_CBAJ_T0067450	-	755	-	-	- (aa)	-	-
MGP_CBAJ_T0067453	-	967	-	-	- (aa)	-	-
MGP_CBAJ_T0067452	-	600	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0028452	Sfpq	55	65.891	MGP_CBAJ_G0021107	Pspc1	84	71.429