EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0028515 (Gene tree)
Gene ID: -
Gene Symbol: Pum1
Alias: AA517475|Kiaa0099|Pumm|mKIAA0099
Full Name: pumilio RNA-binding family member 1
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 129208 bases
Position: chr4:140986458-141115665
Accession: 1931749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0067756	PUF	PF00806.19	3.2e-70	1	8
MGP_CBAJ_P0067756	PUF	PF00806.19	3.2e-70	2	8
MGP_CBAJ_P0067756	PUF	PF00806.19	3.2e-70	3	8
MGP_CBAJ_P0067756	PUF	PF00806.19	3.2e-70	4	8
MGP_CBAJ_P0067756	PUF	PF00806.19	3.2e-70	5	8
MGP_CBAJ_P0067756	PUF	PF00806.19	3.2e-70	6	8
MGP_CBAJ_P0067756	PUF	PF00806.19	3.2e-70	7	8
MGP_CBAJ_P0067756	PUF	PF00806.19	3.2e-70	8	8
MGP_CBAJ_P0067759	PUF	PF00806.19	2.4e-69	1	8
MGP_CBAJ_P0067759	PUF	PF00806.19	2.4e-69	2	8
MGP_CBAJ_P0067759	PUF	PF00806.19	2.4e-69	3	8
MGP_CBAJ_P0067759	PUF	PF00806.19	2.4e-69	4	8
MGP_CBAJ_P0067759	PUF	PF00806.19	2.4e-69	5	8
MGP_CBAJ_P0067759	PUF	PF00806.19	2.4e-69	6	8
MGP_CBAJ_P0067759	PUF	PF00806.19	2.4e-69	7	8
MGP_CBAJ_P0067759	PUF	PF00806.19	2.4e-69	8	8
MGP_CBAJ_P0067755	PUF	PF00806.19	2.8e-69	1	8
MGP_CBAJ_P0067755	PUF	PF00806.19	2.8e-69	2	8
MGP_CBAJ_P0067755	PUF	PF00806.19	2.8e-69	3	8
MGP_CBAJ_P0067755	PUF	PF00806.19	2.8e-69	4	8
MGP_CBAJ_P0067755	PUF	PF00806.19	2.8e-69	5	8
MGP_CBAJ_P0067755	PUF	PF00806.19	2.8e-69	6	8
MGP_CBAJ_P0067755	PUF	PF00806.19	2.8e-69	7	8
MGP_CBAJ_P0067755	PUF	PF00806.19	2.8e-69	8	8
MGP_CBAJ_P0067760	PUF	PF00806.19	5.9e-69	1	8
MGP_CBAJ_P0067760	PUF	PF00806.19	5.9e-69	2	8
MGP_CBAJ_P0067760	PUF	PF00806.19	5.9e-69	3	8
MGP_CBAJ_P0067760	PUF	PF00806.19	5.9e-69	4	8
MGP_CBAJ_P0067760	PUF	PF00806.19	5.9e-69	5	8
MGP_CBAJ_P0067760	PUF	PF00806.19	5.9e-69	6	8
MGP_CBAJ_P0067760	PUF	PF00806.19	5.9e-69	7	8
MGP_CBAJ_P0067760	PUF	PF00806.19	5.9e-69	8	8
MGP_CBAJ_P0067754	PUF	PF00806.19	5.9e-69	1	8
MGP_CBAJ_P0067754	PUF	PF00806.19	5.9e-69	2	8
MGP_CBAJ_P0067754	PUF	PF00806.19	5.9e-69	3	8
MGP_CBAJ_P0067754	PUF	PF00806.19	5.9e-69	4	8
MGP_CBAJ_P0067754	PUF	PF00806.19	5.9e-69	5	8
MGP_CBAJ_P0067754	PUF	PF00806.19	5.9e-69	6	8
MGP_CBAJ_P0067754	PUF	PF00806.19	5.9e-69	7	8
MGP_CBAJ_P0067754	PUF	PF00806.19	5.9e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0067756	-	4614	-	MGP_CBAJ_P0067756	944 (aa)	-	-
MGP_CBAJ_T0067757	-	1273	-	-	- (aa)	-	-
MGP_CBAJ_T0067754	-	5389	XM_006539291	MGP_CBAJ_P0067754	1189 (aa)	XP_006539354	Q80U78
MGP_CBAJ_T0067755	-	5058	-	MGP_CBAJ_P0067755	1092 (aa)	-	-
MGP_CBAJ_T0067760	-	3991	-	MGP_CBAJ_P0067760	1188 (aa)	-	-
MGP_CBAJ_T0067758	-	693	-	MGP_CBAJ_P0067758	218 (aa)	-	-
MGP_CBAJ_T0067759	-	4017	-	MGP_CBAJ_P0067759	1186 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0028515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0028515's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0028515	Pum1	86	87.294	MGP_CBAJ_G0019306	Pum2	100	88.835