EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0028710 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb17
Alias: AA589413|Lp-1|Miz1|Zfp100|Znf151|mZ13
Full Name: zinc finger and BTB domain containing 17
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 28948 bases
Position: chr4:153894034-153922981
Accession: 107410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0068610	zf-C2H2	PF00096.26	2.8e-60	1	10
MGP_CBAJ_P0068610	zf-C2H2	PF00096.26	2.8e-60	2	10
MGP_CBAJ_P0068610	zf-C2H2	PF00096.26	2.8e-60	3	10
MGP_CBAJ_P0068610	zf-C2H2	PF00096.26	2.8e-60	4	10
MGP_CBAJ_P0068610	zf-C2H2	PF00096.26	2.8e-60	5	10
MGP_CBAJ_P0068610	zf-C2H2	PF00096.26	2.8e-60	6	10
MGP_CBAJ_P0068610	zf-C2H2	PF00096.26	2.8e-60	7	10
MGP_CBAJ_P0068610	zf-C2H2	PF00096.26	2.8e-60	8	10
MGP_CBAJ_P0068610	zf-C2H2	PF00096.26	2.8e-60	9	10
MGP_CBAJ_P0068610	zf-C2H2	PF00096.26	2.8e-60	10	10
MGP_CBAJ_P0068610	zf-met	PF12874.7	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0068612	-	2973	-	-	- (aa)	-	-
MGP_CBAJ_T0068613	-	338	-	-	- (aa)	-	-
MGP_CBAJ_T0068610	-	2722	XM_006538727	MGP_CBAJ_P0068610	794 (aa)	XP_006538790	Q60821
MGP_CBAJ_T0068611	-	3478	-	-	- (aa)	-	-
MGP_CBAJ_T0068616	-	867	-	-	- (aa)	-	-
MGP_CBAJ_T0068614	-	785	-	-	- (aa)	-	-
MGP_CBAJ_T0068615	-	771	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0028710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0028710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0028710	Zbtb17	55	41.083	MGP_CBAJ_G0018126	Zfp867	81	41.083
MGP_CBAJ_G0028710	Zbtb17	55	43.322	MGP_CBAJ_G0017981	Zfp454	65	42.424
MGP_CBAJ_G0028710	Zbtb17	63	38.614	MGP_CBAJ_G0030369	Repin1	93	38.614
MGP_CBAJ_G0028710	Zbtb17	62	50.909	MGP_CBAJ_G0029174	Zbtb49	62	67.742
MGP_CBAJ_G0028710	Zbtb17	57	38.750	MGP_CBAJ_G0031596	Zfp780b	78	38.750
MGP_CBAJ_G0028710	Zbtb17	61	42.197	MGP_CBAJ_G0022930	Zfp51	82	42.197
MGP_CBAJ_G0028710	Zbtb17	59	43.976	MGP_CBAJ_G0033431	Zfp709	87	43.976
MGP_CBAJ_G0028710	Zbtb17	58	40.968	MGP_CBAJ_G0033432	Zfp882	85	42.985
MGP_CBAJ_G0028710	Zbtb17	79	46.354	MGP_CBAJ_G0026814	Mynn	85	46.354
MGP_CBAJ_G0028710	Zbtb17	79	32.955	MGP_CBAJ_G0020679	Zfp131	72	32.955
MGP_CBAJ_G0028710	Zbtb17	61	42.727	MGP_CBAJ_G0024306	Zfp236	69	42.727
MGP_CBAJ_G0028710	Zbtb17	77	34.615	MGP_CBAJ_G0022959	Zscan10	78	43.165
MGP_CBAJ_G0028710	Zbtb17	74	44.444	MGP_CBAJ_G0018311	Bcl6b	68	45.312
MGP_CBAJ_G0028710	Zbtb17	71	39.891	MGP_CBAJ_G0022951	Zfp945	93	39.233
MGP_CBAJ_G0028710	Zbtb17	58	42.450	MGP_CBAJ_G0020428	-	55	46.732
MGP_CBAJ_G0028710	Zbtb17	64	42.899	MGP_CBAJ_G0022928	Zfp677	83	42.899
MGP_CBAJ_G0028710	Zbtb17	54	46.512	MGP_CBAJ_G0033801	Zfp1	67	42.083
MGP_CBAJ_G0028710	Zbtb17	58	38.889	MGP_CBAJ_G0032704	-	65	39.487
MGP_CBAJ_G0028710	Zbtb17	58	42.857	MGP_CBAJ_G0032703	Zfp768	52	42.231
MGP_CBAJ_G0028710	Zbtb17	69	44.706	MGP_CBAJ_G0031659	Zfp420	97	44.706
MGP_CBAJ_G0028710	Zbtb17	59	32.021	MGP_CBAJ_G0031523	Zfp574	71	38.532
MGP_CBAJ_G0028710	Zbtb17	62	43.182	MGP_CBAJ_G0031486	Zfp235	71	44.248
MGP_CBAJ_G0028710	Zbtb17	61	43.636	MGP_CBAJ_G0031485	Zfp112	59	43.636
MGP_CBAJ_G0028710	Zbtb17	56	34.530	MGP_CBAJ_G0026587	Zfp334	65	39.216
MGP_CBAJ_G0028710	Zbtb17	56	40.741	MGP_CBAJ_G0031237	Zfp865	78	35.743
MGP_CBAJ_G0028710	Zbtb17	59	36.986	MGP_CBAJ_G0018076	Zfp672	90	40.000
MGP_CBAJ_G0028710	Zbtb17	56	42.638	MGP_CBAJ_G0034135	Zfp872	83	41.964
MGP_CBAJ_G0028710	Zbtb17	56	44.207	MGP_CBAJ_G0031490	Zfp108	66	44.207
MGP_CBAJ_G0028710	Zbtb17	78	39.568	MGP_CBAJ_G0026309	Gzf1	83	37.118
MGP_CBAJ_G0028710	Zbtb17	56	44.086	MGP_CBAJ_G0031493	Zfp94	76	44.086
MGP_CBAJ_G0028710	Zbtb17	58	42.857	MGP_CBAJ_G0031792	Zfp715	89	43.636
MGP_CBAJ_G0028710	Zbtb17	56	41.606	MGP_CBAJ_G0020404	Rslcan18	66	41.600
MGP_CBAJ_G0028710	Zbtb17	58	41.141	MGP_CBAJ_G0020405	Zfp759	86	41.141
MGP_CBAJ_G0028710	Zbtb17	62	34.819	MGP_CBAJ_G0033644	Zfp319	91	37.805