EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0029174 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb49
Alias: 4930518A03Rik|Zfp509|Znf509
Full Name: zinc finger and BTB domain containing 49
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 30708 bases
Position: chr5:39453524-39484231
Accession: 1922329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0071018	zf-C2H2	PF00096.26	1.7e-35	1	7
MGP_CBAJ_P0071018	zf-C2H2	PF00096.26	1.7e-35	2	7
MGP_CBAJ_P0071018	zf-C2H2	PF00096.26	1.7e-35	3	7
MGP_CBAJ_P0071018	zf-C2H2	PF00096.26	1.7e-35	4	7
MGP_CBAJ_P0071018	zf-C2H2	PF00096.26	1.7e-35	5	7
MGP_CBAJ_P0071018	zf-C2H2	PF00096.26	1.7e-35	6	7
MGP_CBAJ_P0071018	zf-C2H2	PF00096.26	1.7e-35	7	7
MGP_CBAJ_P0071023	zf-C2H2	PF00096.26	1.7e-09	1	2
MGP_CBAJ_P0071023	zf-C2H2	PF00096.26	1.7e-09	2	2
MGP_CBAJ_P0071026	zf-C2H2	PF00096.26	8e-06	1	1
MGP_CBAJ_P0071018	zf-met	PF12874.7	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0071023	-	463	-	MGP_CBAJ_P0071023	120 (aa)	-	-
MGP_CBAJ_T0071022	-	2028	-	MGP_CBAJ_P0071022	65 (aa)	-	-
MGP_CBAJ_T0071021	-	2271	-	MGP_CBAJ_P0071021	444 (aa)	-	-
MGP_CBAJ_T0071020	-	1654	-	MGP_CBAJ_P0071020	110 (aa)	-	-
MGP_CBAJ_T0071027	-	1337	-	-	- (aa)	-	-
MGP_CBAJ_T0071026	-	2645	-	MGP_CBAJ_P0071026	480 (aa)	-	-
MGP_CBAJ_T0071025	-	420	-	MGP_CBAJ_P0071025	51 (aa)	-	-
MGP_CBAJ_T0071024	-	688	-	MGP_CBAJ_P0071024	95 (aa)	-	-
MGP_CBAJ_T0071018	-	2977	-	MGP_CBAJ_P0071018	756 (aa)	-	-
MGP_CBAJ_T0071019	-	2721	-	MGP_CBAJ_P0071019	428 (aa)	-	-
MGP_CBAJ_T0071017	-	2862	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0029174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0029174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0029174	Zbtb49	68	46.032	MGP_CBAJ_G0026162	Zfp661	60	44.845
MGP_CBAJ_G0029174	Zbtb49	90	50.704	MGP_CBAJ_G0026814	Mynn	85	45.128
MGP_CBAJ_G0029174	Zbtb49	61	50.704	MGP_CBAJ_G0031486	Zfp235	63	50.000
MGP_CBAJ_G0029174	Zbtb49	60	47.222	MGP_CBAJ_G0030369	Repin1	95	38.889
MGP_CBAJ_G0029174	Zbtb49	62	43.836	MGP_CBAJ_G0035100	Zfp651	71	43.519
MGP_CBAJ_G0029174	Zbtb49	62	67.742	MGP_CBAJ_G0028710	Zbtb17	62	50.909
MGP_CBAJ_G0029174	Zbtb49	78	45.833	MGP_CBAJ_G0030842	Zfp637	78	46.061
MGP_CBAJ_G0029174	Zbtb49	63	50.000	MGP_CBAJ_G0017981	Zfp454	65	47.423
MGP_CBAJ_G0029174	Zbtb49	62	47.887	MGP_CBAJ_G0024306	Zfp236	62	43.023
MGP_CBAJ_G0029174	Zbtb49	85	45.714	MGP_CBAJ_G0033432	Zfp882	85	46.114
MGP_CBAJ_G0029174	Zbtb49	76	48.611	MGP_CBAJ_G0033801	Zfp1	63	49.485
MGP_CBAJ_G0029174	Zbtb49	64	48.611	MGP_CBAJ_G0020428	-	56	50.549
MGP_CBAJ_G0029174	Zbtb49	63	55.882	MGP_CBAJ_G0031229	Zfp628	53	41.949
MGP_CBAJ_G0029174	Zbtb49	78	44.872	MGP_CBAJ_G0018126	Zfp867	83	48.187
MGP_CBAJ_G0029174	Zbtb49	74	50.000	MGP_CBAJ_G0031523	Zfp574	60	43.651
MGP_CBAJ_G0029174	Zbtb49	78	44.444	MGP_CBAJ_G0034135	Zfp872	80	44.330
MGP_CBAJ_G0029174	Zbtb49	68	45.833	MGP_CBAJ_G0031596	Zfp780b	78	42.564
MGP_CBAJ_G0029174	Zbtb49	60	45.588	MGP_CBAJ_G0022936	Gm10226	100	47.561
MGP_CBAJ_G0029174	Zbtb49	60	45.714	MGP_CBAJ_G0018311	Bcl6b	54	47.368
MGP_CBAJ_G0029174	Zbtb49	96	45.070	MGP_CBAJ_G0030499	Prdm5	79	40.244
MGP_CBAJ_G0029174	Zbtb49	62	50.704	MGP_CBAJ_G0022959	Zscan10	89	47.953
MGP_CBAJ_G0029174	Zbtb49	77	45.833	MGP_CBAJ_G0022951	Zfp945	77	43.814
MGP_CBAJ_G0029174	Zbtb49	95	48.611	MGP_CBAJ_G0021719	Zfp251	69	49.741
MGP_CBAJ_G0029174	Zbtb49	62	51.786	MGP_CBAJ_G0029510	Gfi1	100	49.219
MGP_CBAJ_G0029174	Zbtb49	94	45.833	MGP_CBAJ_G0026587	Zfp334	65	47.436
MGP_CBAJ_G0029174	Zbtb49	62	45.205	MGP_CBAJ_G0018713	Zfp652	57	42.593
MGP_CBAJ_G0029174	Zbtb49	62	47.887	MGP_CBAJ_G0016294	Zbtb41	71	41.279
MGP_CBAJ_G0029174	Zbtb49	78	47.143	MGP_CBAJ_G0018076	Zfp672	96	48.214
MGP_CBAJ_G0029174	Zbtb49	75	45.833	MGP_CBAJ_G0020405	Zfp759	90	45.503
MGP_CBAJ_G0029174	Zbtb49	64	48.052	MGP_CBAJ_G0020404	Rslcan18	64	48.503
MGP_CBAJ_G0029174	Zbtb49	62	46.479	MGP_CBAJ_G0026309	Gzf1	66	44.103
MGP_CBAJ_G0029174	Zbtb49	78	46.479	MGP_CBAJ_G0022928	Zfp677	79	46.500
MGP_CBAJ_G0029174	Zbtb49	76	50.000	MGP_CBAJ_G0032703	Zfp768	51	48.810
MGP_CBAJ_G0029174	Zbtb49	64	47.945	MGP_CBAJ_G0032707	E430018J23Rik	62	45.000
MGP_CBAJ_G0029174	Zbtb49	66	45.455	MGP_CBAJ_G0032704	-	78	41.791
MGP_CBAJ_G0029174	Zbtb49	68	48.611	MGP_CBAJ_G0033431	Zfp709	89	47.423
MGP_CBAJ_G0029174	Zbtb49	89	50.000	MGP_CBAJ_G0031659	Zfp420	98	48.744
MGP_CBAJ_G0029174	Zbtb49	74	47.297	MGP_CBAJ_G0031492	Zfp61	53	47.938
MGP_CBAJ_G0029174	Zbtb49	82	50.000	MGP_CBAJ_G0031493	Zfp94	76	48.454
MGP_CBAJ_G0029174	Zbtb49	59	49.296	MGP_CBAJ_G0031490	Zfp108	66	48.077
MGP_CBAJ_G0029174	Zbtb49	68	49.296	MGP_CBAJ_G0031491	Zfp93	55	50.420
MGP_CBAJ_G0029174	Zbtb49	78	48.611	MGP_CBAJ_G0022930	Zfp51	81	44.845
MGP_CBAJ_G0029174	Zbtb49	73	49.275	MGP_CBAJ_G0031792	Zfp715	62	45.026