EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CBAJ_G0029256 (Gene tree)
Gene ID
-
Gene Symbol
Rbm47
Alias
9530077J19Rik
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Mus_musculus_cbaj
Status
putative
Strand
Minus strand
Length
175231 bases
Position
chr5:70648179-70823409
Accession
2384294
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CBAJ_P0071499RRM_1PF00076.223.6e-3713
MGP_CBAJ_P0071499RRM_1PF00076.223.6e-3723
MGP_CBAJ_P0071499RRM_1PF00076.223.6e-3733
MGP_CBAJ_P0071495RRM_1PF00076.225.7e-3713
MGP_CBAJ_P0071495RRM_1PF00076.225.7e-3723
MGP_CBAJ_P0071495RRM_1PF00076.225.7e-3733
MGP_CBAJ_P0071496RRM_1PF00076.225.7e-3713
MGP_CBAJ_P0071496RRM_1PF00076.225.7e-3723
MGP_CBAJ_P0071496RRM_1PF00076.225.7e-3733
MGP_CBAJ_P0071497RRM_1PF00076.225.7e-3713
MGP_CBAJ_P0071497RRM_1PF00076.225.7e-3723
MGP_CBAJ_P0071497RRM_1PF00076.225.7e-3733
MGP_CBAJ_P0071498RRM_1PF00076.225.7e-3713
MGP_CBAJ_P0071498RRM_1PF00076.225.7e-3723
MGP_CBAJ_P0071498RRM_1PF00076.225.7e-3733
MGP_CBAJ_P0071500RRM_1PF00076.225.7e-3713
MGP_CBAJ_P0071500RRM_1PF00076.225.7e-3723
MGP_CBAJ_P0071500RRM_1PF00076.225.7e-3733
MGP_CBAJ_P0071501RRM_1PF00076.225.7e-3713
MGP_CBAJ_P0071501RRM_1PF00076.225.7e-3723
MGP_CBAJ_P0071501RRM_1PF00076.225.7e-3733
MGP_CBAJ_P0071503RRM_1PF00076.222.9e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CBAJ_T0071500-3161-MGP_CBAJ_P0071500590 (aa)--
MGP_CBAJ_T0071501-2171-MGP_CBAJ_P0071501590 (aa)--
MGP_CBAJ_T0071502-2371--- (aa)--
MGP_CBAJ_T0071503-703-MGP_CBAJ_P0071503158 (aa)--
MGP_CBAJ_T0071496-5193-MGP_CBAJ_P0071496590 (aa)--
MGP_CBAJ_T0071497-4625-MGP_CBAJ_P0071497590 (aa)--
MGP_CBAJ_T0071506-530-MGP_CBAJ_P00715066 (aa)--
MGP_CBAJ_T0071495-4685XM_006503956MGP_CBAJ_P0071495590 (aa)XP_006504019Q91WT8
MGP_CBAJ_T0071508-464--- (aa)--
MGP_CBAJ_T0071498-4877-MGP_CBAJ_P0071498590 (aa)--
MGP_CBAJ_T0071499-2954-MGP_CBAJ_P0071499521 (aa)--
MGP_CBAJ_T0071507-452--- (aa)--
MGP_CBAJ_T0071504-504--- (aa)--
MGP_CBAJ_T0071505-332-MGP_CBAJ_P007150513 (aa)--
Gene Model
Click here to download MGP_CBAJ_G0029256's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0029256's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CBAJ_G0029256Rbm478150.781MGP_CBAJ_G0023991Dnd15841.748
MGP_CBAJ_G0029256Rbm479473.649MGP_CBAJ_G0027021Rbm466672.468
MGP_CBAJ_G0029256Rbm478967.376MGP_CBAJ_G0024747A1cf7557.816
MGP_CBAJ_G0029256Rbm478858.451MGP_CBAJ_G0034763Syncrip7557.522
MGP_CBAJ_G0029256Rbm478859.859MGP_CBAJ_G0028627Hnrnpr7748.642

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