EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CBAJ_G0029449 (Gene tree)
Gene ID
-
Gene Symbol
Hnrnpd
Alias
Auf1|Hnrpd
Full Name
heterogeneous nuclear ribonucleoprotein D
Gene Type
protein_coding
Species
Mus_musculus_cbaj
Status
putative
Strand
Minus strand
Length
23040 bases
Position
chr5:109282167-109305206
Accession
101947
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CBAJ_P0072391CBFNTPF08143.111.2e-1111
MGP_CBAJ_P0072389CBFNTPF08143.111.3e-1111
MGP_CBAJ_P0072390CBFNTPF08143.111.6e-1111
MGP_CBAJ_P0072388CBFNTPF08143.111.7e-1111
MGP_CBAJ_P0072391RRM_1PF00076.227.4e-3612
MGP_CBAJ_P0072391RRM_1PF00076.227.4e-3622
MGP_CBAJ_P0072389RRM_1PF00076.228.9e-3612
MGP_CBAJ_P0072389RRM_1PF00076.228.9e-3622
MGP_CBAJ_P0072390RRM_1PF00076.221.2e-3512
MGP_CBAJ_P0072390RRM_1PF00076.221.2e-3522
MGP_CBAJ_P0072388RRM_1PF00076.221.4e-3512
MGP_CBAJ_P0072388RRM_1PF00076.221.4e-3522
MGP_CBAJ_P0072397RRM_1PF00076.222.3e-2311
MGP_CBAJ_P0072398RRM_1PF00076.221.4e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CBAJ_T0072389-2000-MGP_CBAJ_P0072389306 (aa)--
MGP_CBAJ_T0072388-6822XM_006534735MGP_CBAJ_P0072388355 (aa)XP_006534798Q60668
MGP_CBAJ_T0072390-1670-MGP_CBAJ_P0072390336 (aa)--
MGP_CBAJ_T0072391-1537-MGP_CBAJ_P0072391287 (aa)--
MGP_CBAJ_T0072392-1117-MGP_CBAJ_P0072392215 (aa)--
MGP_CBAJ_T0072393-737-MGP_CBAJ_P0072393150 (aa)--
MGP_CBAJ_T0072394-699-MGP_CBAJ_P0072394131 (aa)--
MGP_CBAJ_T0072395-1104-MGP_CBAJ_P007239586 (aa)--
MGP_CBAJ_T0072396-425--- (aa)--
MGP_CBAJ_T0072397-493-MGP_CBAJ_P0072397107 (aa)--
MGP_CBAJ_T0072398-478-MGP_CBAJ_P007239825 (aa)--
Gene Model
Click here to download MGP_CBAJ_G0029449's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0029449's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CBAJ_G0029449Hnrnpd5535.593MGP_CBAJ_G0030638Tia16932.308
MGP_CBAJ_G0029449Hnrnpd7032.000MGP_CBAJ_G0028108Elavl25831.169
MGP_CBAJ_G0029449Hnrnpd9738.806MGP_CBAJ_G0020550Gm171906636.885
MGP_CBAJ_G0029449Hnrnpd10064.000MGP_CBAJ_G0028793Tardbp7738.194
MGP_CBAJ_G0029449Hnrnpd5136.364MGP_CBAJ_G0026647Rbm385136.364
MGP_CBAJ_G0029449Hnrnpd9545.370MGP_CBAJ_G0025569Hnrnpa35840.777
MGP_CBAJ_G0029449Hnrnpd10088.000MGP_CBAJ_G0017995Hnrnpab7972.052
MGP_CBAJ_G0029449Hnrnpd6935.294MGP_CBAJ_G0015777Boll5134.783
MGP_CBAJ_G0029449Hnrnpd10037.838MGP_CBAJ_G0020336Hnrnpa08634.173
MGP_CBAJ_G0029449Hnrnpd5731.884MGP_CBAJ_G0029760Snrnp355135.484
MGP_CBAJ_G0029449Hnrnpd10072.000MGP_CBAJ_G0018650Msi210053.982
MGP_CBAJ_G0029449Hnrnpd8437.363MGP_CBAJ_G0035395Rbmx8343.750
MGP_CBAJ_G0029449Hnrnpd9744.545MGP_CBAJ_G0030402Hnrnpa2b17241.148
MGP_CBAJ_G0029449Hnrnpd7133.333MGP_CBAJ_G0019703Slirp7033.333
MGP_CBAJ_G0029449Hnrnpd10080.000MGP_CBAJ_G0029451Hnrnpdl8965.278
MGP_CBAJ_G0029449Hnrnpd10068.000MGP_CBAJ_G0029632Msi15949.485
MGP_CBAJ_G0029449Hnrnpd8436.559MGP_CBAJ_G0017221Cirbp8338.776
MGP_CBAJ_G0029449Hnrnpd10056.000MGP_CBAJ_G0017227Dazap19841.935
MGP_CBAJ_G0029449Hnrnpd7034.667MGP_CBAJ_G0035193Rbm38036.709
MGP_CBAJ_G0029449Hnrnpd8137.500MGP_CBAJ_G0033470-6345.833

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