EuRBPDB

Description

Ensembl ID: MGP_CBAJ_G0029451 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpdl
Alias: AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|HnrpdlGN|JKTBP|hnRNP DL|hnRNP-DL
Full Name: heterogeneous nuclear ribonucleoprotein D-like
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 6111 bases
Position: chr5:109369630-109375740
Accession: 1355299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0072402	RRM_1	PF00076.22	2.3e-33	1	2
MGP_CBAJ_P0072402	RRM_1	PF00076.22	2.3e-33	2	2
MGP_CBAJ_P0072401	RRM_1	PF00076.22	5.3e-33	1	2
MGP_CBAJ_P0072401	RRM_1	PF00076.22	5.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0072400	-	1842	-	-	- (aa)	-	-
MGP_CBAJ_T0072401	-	2752	-	MGP_CBAJ_P0072401	420 (aa)	-	-
MGP_CBAJ_T0072402	-	2374	-	MGP_CBAJ_P0072402	322 (aa)	-	-
MGP_CBAJ_T0072403	-	2149	-	MGP_CBAJ_P0072403	420 (aa)	-	-
MGP_CBAJ_T0072404	-	884	-	-	- (aa)	-	-
MGP_CBAJ_T0072405	-	1506	-	MGP_CBAJ_P0072405	110 (aa)	-	-
MGP_CBAJ_T0072406	-	846	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0029451	Hnrnpdl	51	34.706	MGP_CBAJ_G0020336	Hnrnpa0	56	34.706
MGP_CBAJ_G0029451	Hnrnpdl	75	39.676	MGP_CBAJ_G0029632	Msi1	58	48.052
MGP_CBAJ_G0029451	Hnrnpdl	58	38.542	MGP_CBAJ_G0030402	Hnrnpa2b1	58	38.824
MGP_CBAJ_G0029451	Hnrnpdl	89	65.278	MGP_CBAJ_G0029449	Hnrnpd	100	80.000
MGP_CBAJ_G0029451	Hnrnpdl	64	30.000	MGP_CBAJ_G0028793	Tardbp	77	31.447
MGP_CBAJ_G0029451	Hnrnpdl	69	36.036	MGP_CBAJ_G0017227	Dazap1	99	39.881
MGP_CBAJ_G0029451	Hnrnpdl	54	36.709	MGP_CBAJ_G0017221	Cirbp	73	36.709
MGP_CBAJ_G0029451	Hnrnpdl	89	57.292	MGP_CBAJ_G0017995	Hnrnpab	82	58.419
MGP_CBAJ_G0029451	Hnrnpdl	78	41.634	MGP_CBAJ_G0018650	Msi2	100	54.867