EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0029510 (Gene tree)
Gene ID: -
Gene Symbol: Gfi1
Alias: AW495828|Gfi-1|Pal-1|Pal1
Full Name: growth factor independent 1
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 9325 bases
Position: chr5:118106788-118116112
Accession: 103170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0072685	zf-C2H2	PF00096.26	5e-28	1	6
MGP_CBAJ_P0072685	zf-C2H2	PF00096.26	5e-28	2	6
MGP_CBAJ_P0072685	zf-C2H2	PF00096.26	5e-28	3	6
MGP_CBAJ_P0072685	zf-C2H2	PF00096.26	5e-28	4	6
MGP_CBAJ_P0072685	zf-C2H2	PF00096.26	5e-28	5	6
MGP_CBAJ_P0072685	zf-C2H2	PF00096.26	5e-28	6	6
MGP_CBAJ_P0072686	zf-C2H2	PF00096.26	5e-28	1	6
MGP_CBAJ_P0072686	zf-C2H2	PF00096.26	5e-28	2	6
MGP_CBAJ_P0072686	zf-C2H2	PF00096.26	5e-28	3	6
MGP_CBAJ_P0072686	zf-C2H2	PF00096.26	5e-28	4	6
MGP_CBAJ_P0072686	zf-C2H2	PF00096.26	5e-28	5	6
MGP_CBAJ_P0072686	zf-C2H2	PF00096.26	5e-28	6	6
MGP_CBAJ_P0072687	zf-C2H2	PF00096.26	1.5e-27	1	6
MGP_CBAJ_P0072687	zf-C2H2	PF00096.26	1.5e-27	2	6
MGP_CBAJ_P0072687	zf-C2H2	PF00096.26	1.5e-27	3	6
MGP_CBAJ_P0072687	zf-C2H2	PF00096.26	1.5e-27	4	6
MGP_CBAJ_P0072687	zf-C2H2	PF00096.26	1.5e-27	5	6
MGP_CBAJ_P0072687	zf-C2H2	PF00096.26	1.5e-27	6	6
MGP_CBAJ_P0072688	zf-C2H2	PF00096.26	9.4e-25	1	4
MGP_CBAJ_P0072688	zf-C2H2	PF00096.26	9.4e-25	2	4
MGP_CBAJ_P0072688	zf-C2H2	PF00096.26	9.4e-25	3	4
MGP_CBAJ_P0072688	zf-C2H2	PF00096.26	9.4e-25	4	4
MGP_CBAJ_P0072688	zf-met	PF12874.7	2.2e-08	1	1
MGP_CBAJ_P0072685	zf-met	PF12874.7	2.5e-07	1	1
MGP_CBAJ_P0072686	zf-met	PF12874.7	2.5e-07	1	1
MGP_CBAJ_P0072687	zf-met	PF12874.7	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0072688	-	1482	-	MGP_CBAJ_P0072688	135 (aa)	-	-
MGP_CBAJ_T0072689	-	689	-	MGP_CBAJ_P0072689	186 (aa)	-	-
MGP_CBAJ_T0072686	-	2860	-	MGP_CBAJ_P0072686	423 (aa)	-	-
MGP_CBAJ_T0072687	-	2639	-	MGP_CBAJ_P0072687	489 (aa)	-	-
MGP_CBAJ_T0072685	-	2648	XM_006534791	MGP_CBAJ_P0072685	423 (aa)	XP_006534854	A0A0R4J292

Gene Model

Click here to download MGP_CBAJ_G0029510's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0029510's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0029510	Gfi1	100	46.715	MGP_CBAJ_G0031596	Zfp780b	79	46.715
MGP_CBAJ_G0029510	Gfi1	100	47.015	MGP_CBAJ_G0022930	Zfp51	75	44.828
MGP_CBAJ_G0029510	Gfi1	100	49.254	MGP_CBAJ_G0021719	Zfp251	74	47.024
MGP_CBAJ_G0029510	Gfi1	100	45.794	MGP_CBAJ_G0017981	Zfp454	68	42.262
MGP_CBAJ_G0029510	Gfi1	100	48.507	MGP_CBAJ_G0031659	Zfp420	97	49.194
MGP_CBAJ_G0029510	Gfi1	100	46.457	MGP_CBAJ_G0033801	Zfp1	60	43.478
MGP_CBAJ_G0029510	Gfi1	99	48.507	MGP_CBAJ_G0026162	Zfp661	58	48.175
MGP_CBAJ_G0029510	Gfi1	100	47.788	MGP_CBAJ_G0020404	Rslcan18	71	47.788
MGP_CBAJ_G0029510	Gfi1	100	47.863	MGP_CBAJ_G0026587	Zfp334	62	47.333
MGP_CBAJ_G0029510	Gfi1	100	49.219	MGP_CBAJ_G0029174	Zbtb49	62	51.786
MGP_CBAJ_G0029510	Gfi1	99	47.287	MGP_CBAJ_G0030369	Repin1	90	47.287
MGP_CBAJ_G0029510	Gfi1	100	46.018	MGP_CBAJ_G0020405	Zfp759	88	46.018
MGP_CBAJ_G0029510	Gfi1	100	45.522	MGP_CBAJ_G0033431	Zfp709	88	43.976
MGP_CBAJ_G0029510	Gfi1	100	46.739	MGP_CBAJ_G0024306	Zfp236	54	46.739
MGP_CBAJ_G0029510	Gfi1	99	47.368	MGP_CBAJ_G0031237	Zfp865	66	46.753
MGP_CBAJ_G0029510	Gfi1	100	50.427	MGP_CBAJ_G0031490	Zfp108	65	45.000
MGP_CBAJ_G0029510	Gfi1	100	47.748	MGP_CBAJ_G0031491	Zfp93	55	46.207
MGP_CBAJ_G0029510	Gfi1	100	46.457	MGP_CBAJ_G0031493	Zfp94	65	44.970
MGP_CBAJ_G0029510	Gfi1	99	45.133	MGP_CBAJ_G0030499	Prdm5	74	41.463
MGP_CBAJ_G0029510	Gfi1	100	44.882	MGP_CBAJ_G0031792	Zfp715	63	43.210
MGP_CBAJ_G0029510	Gfi1	100	54.321	MGP_CBAJ_G0032703	Zfp768	51	45.833
MGP_CBAJ_G0029510	Gfi1	99	47.222	MGP_CBAJ_G0032704	-	67	41.212
MGP_CBAJ_G0029510	Gfi1	99	45.038	MGP_CBAJ_G0032707	E430018J23Rik	60	42.197
MGP_CBAJ_G0029510	Gfi1	100	48.276	MGP_CBAJ_G0018076	Zfp672	90	48.276
MGP_CBAJ_G0029510	Gfi1	100	46.094	MGP_CBAJ_G0033432	Zfp882	85	46.094
MGP_CBAJ_G0029510	Gfi1	100	48.031	MGP_CBAJ_G0031486	Zfp235	61	46.377
MGP_CBAJ_G0029510	Gfi1	100	49.580	MGP_CBAJ_G0020428	-	56	49.580
MGP_CBAJ_G0029510	Gfi1	100	47.368	MGP_CBAJ_G0026625	Zfp64	70	38.298
MGP_CBAJ_G0029510	Gfi1	100	43.590	MGP_CBAJ_G0030842	Zfp637	71	43.590
MGP_CBAJ_G0029510	Gfi1	100	39.535	MGP_CBAJ_G0033644	Zfp319	93	40.116
MGP_CBAJ_G0029510	Gfi1	99	45.714	MGP_CBAJ_G0031523	Zfp574	62	43.925
MGP_CBAJ_G0029510	Gfi1	100	44.030	MGP_CBAJ_G0034135	Zfp872	80	41.477
MGP_CBAJ_G0029510	Gfi1	100	45.238	MGP_CBAJ_G0018126	Zfp867	79	43.023
MGP_CBAJ_G0029510	Gfi1	99	44.444	MGP_CBAJ_G0031240	Zfp784	71	44.444
MGP_CBAJ_G0029510	Gfi1	100	45.312	MGP_CBAJ_G0022928	Zfp677	79	43.452
MGP_CBAJ_G0029510	Gfi1	100	42.857	MGP_CBAJ_G0022959	Zscan10	77	42.771