EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0029628 (Gene tree)
Gene ID: -
Gene Symbol: Srsf9
Alias: 25kDa|2610029M16Rik|SRp30c|Sfrs9
Full Name: serine/arginine-rich splicing factor 9
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 5845 bases
Position: chr5:127458254-127464098
Accession: 104896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0073283	RRM_1	PF00076.22	3.6e-33	1	2
MGP_CBAJ_P0073283	RRM_1	PF00076.22	3.6e-33	2	2
MGP_CBAJ_P0073286	RRM_1	PF00076.22	9.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0073283	-	1162	XM_011248158	MGP_CBAJ_P0073283	222 (aa)	XP_011246460	Q9D0B0
MGP_CBAJ_T0073285	-	474	-	-	- (aa)	-	-
MGP_CBAJ_T0073284	-	901	-	-	- (aa)	-	-
MGP_CBAJ_T0073286	-	767	-	MGP_CBAJ_P0073286	158 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0029628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0029628's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0029628	Srsf9	70	38.674	MGP_CBAJ_G0026507	Srsf6	51	47.297
MGP_CBAJ_G0029628	Srsf9	68	39.394	MGP_CBAJ_G0019609	Srsf5	89	48.780
MGP_CBAJ_G0029628	Srsf9	78	70.330	MGP_CBAJ_G0018645	Srsf1	79	79.762