EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0029663 (Gene tree)
Gene ID: -
Gene Symbol: Rbm19
Alias: 1200009A02Rik|AV302714|NPO
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 82475 bases
Position: chr5:133062688-133145162
Accession: 1921361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0073474	RRM_1	PF00076.22	1.1e-85	1	5
MGP_CBAJ_P0073474	RRM_1	PF00076.22	1.1e-85	2	5
MGP_CBAJ_P0073474	RRM_1	PF00076.22	1.1e-85	3	5
MGP_CBAJ_P0073474	RRM_1	PF00076.22	1.1e-85	4	5
MGP_CBAJ_P0073474	RRM_1	PF00076.22	1.1e-85	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0073483	-	360	-	-	- (aa)	-	-
MGP_CBAJ_T0073482	-	391	-	-	- (aa)	-	-
MGP_CBAJ_T0073481	-	1933	-	-	- (aa)	-	-
MGP_CBAJ_T0073480	-	485	-	-	- (aa)	-	-
MGP_CBAJ_T0073478	-	1396	-	-	- (aa)	-	-
MGP_CBAJ_T0073479	-	635	-	-	- (aa)	-	-
MGP_CBAJ_T0073476	-	3900	-	MGP_CBAJ_P0073476	870 (aa)	-	-
MGP_CBAJ_T0073477	-	600	-	-	- (aa)	-	-
MGP_CBAJ_T0073474	-	4010	-	MGP_CBAJ_P0073474	952 (aa)	-	Q8R3C6
MGP_CBAJ_T0073475	-	455	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0029663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0029663's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0029663	Rbm19	70	34.667	MGP_CBAJ_G0022842	Pabpc6	57	34.667
MGP_CBAJ_G0029663	Rbm19	54	30.412	MGP_CBAJ_G0021507	-	61	30.412
MGP_CBAJ_G0029663	Rbm19	72	36.066	MGP_CBAJ_G0026528	Pabpc1l	60	35.484
MGP_CBAJ_G0029663	Rbm19	70	34.667	MGP_CBAJ_G0024072	Pabpc2	59	34.667