EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0029763 (Gene tree)
Gene ID: -
Gene Symbol: Ddx55
Alias: 2810021H22Rik|Kiaa1595|mKIAA1595
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 20262 bases
Position: chr5:138584326-138604587
Accession: 1915098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0074065	ResIII	PF04851.15	7.6e-07	1	1
MGP_CBAJ_P0074062	ResIII	PF04851.15	7.9e-07	1	1
MGP_CBAJ_P0074065	DEAD	PF00270.29	1e-41	1	1
MGP_CBAJ_P0074062	DEAD	PF00270.29	1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0074068	-	824	-	-	- (aa)	-	-
MGP_CBAJ_T0074064	-	445	-	-	- (aa)	-	-
MGP_CBAJ_T0074065	-	2737	-	MGP_CBAJ_P0074065	596 (aa)	-	-
MGP_CBAJ_T0074066	-	477	-	-	- (aa)	-	-
MGP_CBAJ_T0074067	-	1430	-	-	- (aa)	-	-
MGP_CBAJ_T0074062	-	2799	-	MGP_CBAJ_P0074062	600 (aa)	-	Q6ZPL9
MGP_CBAJ_T0074063	-	3516	-	MGP_CBAJ_P0074063	135 (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0029763's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0029763's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0029763	Ddx55	64	33.747	MGP_CBAJ_G0035227	Ddx3x	56	33.663
MGP_CBAJ_G0029763	Ddx55	63	30.750	MGP_CBAJ_G0018588	Ddx52	62	30.750
MGP_CBAJ_G0029763	Ddx55	79	36.042	MGP_CBAJ_G0016154	Ddx18	68	36.192
MGP_CBAJ_G0029763	Ddx55	60	43.284	MGP_CBAJ_G0019198	Eif4a3	74	43.284
MGP_CBAJ_G0029763	Ddx55	58	33.056	MGP_CBAJ_G0033366	Ddx49	92	33.238
MGP_CBAJ_G0029763	Ddx55	60	30.886	MGP_CBAJ_G0033733	Ddx28	69	30.886
MGP_CBAJ_G0029763	Ddx55	60	32.687	MGP_CBAJ_G0021780	Ddx17	53	32.687
MGP_CBAJ_G0029763	Ddx55	60	32.044	MGP_CBAJ_G0034722	Ddx43	53	31.768
MGP_CBAJ_G0029763	Ddx55	75	38.411	MGP_CBAJ_G0034461	Ddx10	50	38.411
MGP_CBAJ_G0029763	Ddx55	59	30.392	MGP_CBAJ_G0018272	Eif4a1	92	32.479
MGP_CBAJ_G0029763	Ddx55	64	33.995	MGP_CBAJ_G0016656	D1Pas1	56	33.995
MGP_CBAJ_G0029763	Ddx55	59	31.429	MGP_CBAJ_G0016283	Ddx59	54	31.429
MGP_CBAJ_G0029763	Ddx55	75	31.528	MGP_CBAJ_G0025245	Ddx31	74	31.783
MGP_CBAJ_G0029763	Ddx55	59	35.440	MGP_CBAJ_G0020311	Ddx41	55	35.440
MGP_CBAJ_G0029763	Ddx55	59	35.977	MGP_CBAJ_G0031075	Ddx47	81	35.977