EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0030402 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa2b1
Alias: 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A
Full Name: heterogeneous nuclear ribonucleoprotein A2/B1
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 8964 bases
Position: chr6:53941252-53950215
Accession: 104819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0077118	RRM_1	PF00076.22	3.3e-32	1	2
MGP_CBAJ_P0077118	RRM_1	PF00076.22	3.3e-32	2	2
MGP_CBAJ_P0077124	RRM_1	PF00076.22	3.3e-32	1	2
MGP_CBAJ_P0077124	RRM_1	PF00076.22	3.3e-32	2	2
MGP_CBAJ_P0077121	RRM_1	PF00076.22	4.9e-32	1	2
MGP_CBAJ_P0077121	RRM_1	PF00076.22	4.9e-32	2	2
MGP_CBAJ_P0077125	RRM_1	PF00076.22	4.9e-32	1	2
MGP_CBAJ_P0077125	RRM_1	PF00076.22	4.9e-32	2	2
MGP_CBAJ_P0077123	RRM_1	PF00076.22	5.5e-32	1	2
MGP_CBAJ_P0077123	RRM_1	PF00076.22	5.5e-32	2	2
MGP_CBAJ_P0077127	RRM_1	PF00076.22	1.9e-15	1	1
MGP_CBAJ_P0077127	HnRNPA1	PF11627.8	1.9e-16	1	1
MGP_CBAJ_P0077118	HnRNPA1	PF11627.8	2.1e-06	1	1
MGP_CBAJ_P0077124	HnRNPA1	PF11627.8	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0077119	-	1703	-	MGP_CBAJ_P0077119	353 (aa)	-	-
MGP_CBAJ_T0077118	-	1647	XM_006506373	MGP_CBAJ_P0077118	301 (aa)	XP_006506436	O88569
MGP_CBAJ_T0077130	-	3645	-	-	- (aa)	-	-
MGP_CBAJ_T0077124	-	1518	-	MGP_CBAJ_P0077124	301 (aa)	-	-
MGP_CBAJ_T0077125	-	1638	-	MGP_CBAJ_P0077125	341 (aa)	-	-
MGP_CBAJ_T0077126	-	766	-	-	- (aa)	-	-
MGP_CBAJ_T0077127	-	466	-	MGP_CBAJ_P0077127	154 (aa)	-	-
MGP_CBAJ_T0077120	-	1542	-	MGP_CBAJ_P0077120	301 (aa)	-	-
MGP_CBAJ_T0077121	-	1662	-	MGP_CBAJ_P0077121	341 (aa)	-	-
MGP_CBAJ_T0077122	-	1554	-	-	- (aa)	-	-
MGP_CBAJ_T0077123	-	1728	-	MGP_CBAJ_P0077123	353 (aa)	-	-
MGP_CBAJ_T0077128	-	706	-	-	- (aa)	-	-
MGP_CBAJ_T0077129	-	596	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0030402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0030402's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0030402	Hnrnpa2b1	82	74.286	MGP_CBAJ_G0022137	Hnrnpa1	54	68.142
MGP_CBAJ_G0030402	Hnrnpa2b1	58	38.824	MGP_CBAJ_G0029451	Hnrnpdl	58	38.542
MGP_CBAJ_G0030402	Hnrnpa2b1	56	38.554	MGP_CBAJ_G0035395	Rbmx	90	40.299
MGP_CBAJ_G0030402	Hnrnpa2b1	69	31.776	MGP_CBAJ_G0015777	Boll	64	33.333
MGP_CBAJ_G0030402	Hnrnpa2b1	66	32.143	MGP_CBAJ_G0034556	Celf6	79	31.250
MGP_CBAJ_G0030402	Hnrnpa2b1	60	41.026	MGP_CBAJ_G0017227	Dazap1	99	40.237
MGP_CBAJ_G0030402	Hnrnpa2b1	50	44.737	MGP_CBAJ_G0017221	Cirbp	70	44.737
MGP_CBAJ_G0030402	Hnrnpa2b1	91	41.379	MGP_CBAJ_G0029632	Msi1	61	43.750
MGP_CBAJ_G0030402	Hnrnpa2b1	54	40.260	MGP_CBAJ_G0033470	-	55	38.554
MGP_CBAJ_G0030402	Hnrnpa2b1	56	48.193	MGP_CBAJ_G0018650	Msi2	100	44.348
MGP_CBAJ_G0030402	Hnrnpa2b1	59	72.527	MGP_CBAJ_G0025569	Hnrnpa3	55	69.802
MGP_CBAJ_G0030402	Hnrnpa2b1	61	38.068	MGP_CBAJ_G0017995	Hnrnpab	64	37.368
MGP_CBAJ_G0030402	Hnrnpa2b1	59	55.307	MGP_CBAJ_G0020336	Hnrnpa0	91	49.640
MGP_CBAJ_G0030402	Hnrnpa2b1	72	41.148	MGP_CBAJ_G0029449	Hnrnpd	97	44.545
MGP_CBAJ_G0030402	Hnrnpa2b1	66	30.348	MGP_CBAJ_G0028793	Tardbp	94	30.282