EuRBPDB

Description

Ensembl ID: MGP_CBAJ_G0030494 (Gene tree)
Gene ID: -
Gene Symbol: Smarcad1
Alias: AV081750|AW226546|D6Pas1|Etl1|Kiaa1122|mKIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 89452 bases
Position: chr6:69165360-69254811
Accession: 95453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0077447	ResIII	PF04851.15	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0077458	-	3062	-	-	- (aa)	-	-
MGP_CBAJ_T0077459	-	643	-	-	- (aa)	-	-
MGP_CBAJ_T0077457	-	726	-	MGP_CBAJ_P0077457	45 (aa)	-	-
MGP_CBAJ_T0077447	-	5166	-	MGP_CBAJ_P0077447	1021 (aa)	-	-
MGP_CBAJ_T0077446	-	602	XM_006505509	MGP_CBAJ_P0077446	134 (aa)	XP_006505572	Q04692
MGP_CBAJ_T0077460	-	2525	-	-	- (aa)	-	-
MGP_CBAJ_T0077456	-	635	-	-	- (aa)	-	-
MGP_CBAJ_T0077450	-	734	-	MGP_CBAJ_P0077450	73 (aa)	-	-
MGP_CBAJ_T0077451	-	472	-	MGP_CBAJ_P0077451	68 (aa)	-	-
MGP_CBAJ_T0077452	-	739	-	MGP_CBAJ_P0077452	73 (aa)	-	-
MGP_CBAJ_T0077453	-	2821	-	-	- (aa)	-	-
MGP_CBAJ_T0077454	-	4177	-	MGP_CBAJ_P0077454	123 (aa)	-	-
MGP_CBAJ_T0077455	-	643	-	-	- (aa)	-	-
MGP_CBAJ_T0077449	-	600	-	MGP_CBAJ_P0077449	73 (aa)	-	-
MGP_CBAJ_T0077448	-	466	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0030494	Smarcad1	50	30.112	MGP_CBAJ_G0028281	Rad54l	66	30.112
MGP_CBAJ_G0030494	Smarcad1	50	35.135	MGP_CBAJ_G0027320	Chd1l	51	35.135
MGP_CBAJ_G0030494	Smarcad1	51	37.705	MGP_CBAJ_G0024806	Hells	66	37.887