EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0078160	RRM_1	PF00076.22	4.5e-68	1	3
MGP_CBAJ_P0078160	RRM_1	PF00076.22	4.5e-68	2	3
MGP_CBAJ_P0078160	RRM_1	PF00076.22	4.5e-68	3	3
MGP_CBAJ_P0078154	RRM_1	PF00076.22	1.9e-67	1	3
MGP_CBAJ_P0078154	RRM_1	PF00076.22	1.9e-67	2	3
MGP_CBAJ_P0078154	RRM_1	PF00076.22	1.9e-67	3	3
MGP_CBAJ_P0078147	RRM_1	PF00076.22	2.1e-67	1	3
MGP_CBAJ_P0078147	RRM_1	PF00076.22	2.1e-67	2	3
MGP_CBAJ_P0078147	RRM_1	PF00076.22	2.1e-67	3	3
MGP_CBAJ_P0078146	RRM_1	PF00076.22	2.1e-67	1	3
MGP_CBAJ_P0078146	RRM_1	PF00076.22	2.1e-67	2	3
MGP_CBAJ_P0078146	RRM_1	PF00076.22	2.1e-67	3	3
MGP_CBAJ_P0078155	RRM_1	PF00076.22	2.3e-58	1	3
MGP_CBAJ_P0078155	RRM_1	PF00076.22	2.3e-58	2	3
MGP_CBAJ_P0078155	RRM_1	PF00076.22	2.3e-58	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0078169	-	877	-	-	- (aa)	-	-
MGP_CBAJ_T0078168	-	627	-	-	- (aa)	-	-
MGP_CBAJ_T0078165	-	706	-	-	- (aa)	-	-
MGP_CBAJ_T0078164	-	2664	-	-	- (aa)	-	-
MGP_CBAJ_T0078167	-	758	-	-	- (aa)	-	-
MGP_CBAJ_T0078166	-	750	-	-	- (aa)	-	-
MGP_CBAJ_T0078161	-	864	-	-	- (aa)	-	-
MGP_CBAJ_T0078160	-	3107	-	MGP_CBAJ_P0078160	377 (aa)	-	-
MGP_CBAJ_T0078163	-	1916	-	-	- (aa)	-	-
MGP_CBAJ_T0078162	-	823	-	-	- (aa)	-	-
MGP_CBAJ_T0078147	-	1789	-	MGP_CBAJ_P0078147	385 (aa)	-	-
MGP_CBAJ_T0078146	-	4476	XM_006505889	MGP_CBAJ_P0078146	386 (aa)	XP_006505952	P52912
MGP_CBAJ_T0078149	-	422	-	-	- (aa)	-	-
MGP_CBAJ_T0078148	-	934	-	-	- (aa)	-	-
MGP_CBAJ_T0078172	-	585	-	-	- (aa)	-	-
MGP_CBAJ_T0078173	-	597	-	MGP_CBAJ_P0078173	105 (aa)	-	-
MGP_CBAJ_T0078170	-	2545	-	-	- (aa)	-	-
MGP_CBAJ_T0078171	-	716	-	-	- (aa)	-	-
MGP_CBAJ_T0078154	-	3129	-	MGP_CBAJ_P0078154	375 (aa)	-	-
MGP_CBAJ_T0078155	-	1444	-	MGP_CBAJ_P0078155	285 (aa)	-	-
MGP_CBAJ_T0078156	-	1290	-	MGP_CBAJ_P0078156	93 (aa)	-	-
MGP_CBAJ_T0078157	-	797	-	-	- (aa)	-	-
MGP_CBAJ_T0078150	-	4420	-	-	- (aa)	-	-
MGP_CBAJ_T0078151	-	612	-	-	- (aa)	-	-
MGP_CBAJ_T0078152	-	1203	-	MGP_CBAJ_P0078152	133 (aa)	-	-
MGP_CBAJ_T0078153	-	3854	-	-	- (aa)	-	-
MGP_CBAJ_T0078158	-	4325	-	MGP_CBAJ_P0078158	212 (aa)	-	-
MGP_CBAJ_T0078159	-	1178	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0030638	Tia1	87	38.095	MGP_CBAJ_G0026528	Pabpc1l	59	38.095
MGP_CBAJ_G0030638	Tia1	84	34.247	MGP_CBAJ_G0035698	Pabpc5	93	33.333
MGP_CBAJ_G0030638	Tia1	89	34.615	MGP_CBAJ_G0028108	Elavl2	96	34.615
MGP_CBAJ_G0030638	Tia1	98	31.169	MGP_CBAJ_G0034128	Elavl3	90	37.179
MGP_CBAJ_G0030638	Tia1	70	41.333	MGP_CBAJ_G0035193	Rbm3	99	35.955
MGP_CBAJ_G0030638	Tia1	77	35.870	MGP_CBAJ_G0027303	Rbm8a	54	35.870
MGP_CBAJ_G0030638	Tia1	97	86.992	MGP_CBAJ_G0032753	Tial1	100	87.440
MGP_CBAJ_G0030638	Tia1	95	30.000	MGP_CBAJ_G0026882	Pabpc4l	95	30.539
MGP_CBAJ_G0030638	Tia1	87	38.095	MGP_CBAJ_G0021507	-	60	38.095
MGP_CBAJ_G0030638	Tia1	85	36.000	MGP_CBAJ_G0034556	Celf6	62	32.955
MGP_CBAJ_G0030638	Tia1	99	31.579	MGP_CBAJ_G0033001	Elavl1	95	32.298
MGP_CBAJ_G0030638	Tia1	80	34.043	MGP_CBAJ_G0035395	Rbmx	98	34.409
MGP_CBAJ_G0030638	Tia1	93	38.667	MGP_CBAJ_G0027235	Celf3	77	37.805
MGP_CBAJ_G0030638	Tia1	98	32.895	MGP_CBAJ_G0028241	Elavl4	94	35.897
MGP_CBAJ_G0030638	Tia1	77	35.897	MGP_CBAJ_G0033470	-	66	34.043
MGP_CBAJ_G0030638	Tia1	95	33.333	MGP_CBAJ_G0028401	Pabpc4	100	33.333
MGP_CBAJ_G0030638	Tia1	80	37.778	MGP_CBAJ_G0017221	Cirbp	91	35.714
MGP_CBAJ_G0030638	Tia1	96	36.905	MGP_CBAJ_G0022842	Pabpc6	58	36.905
MGP_CBAJ_G0030638	Tia1	69	32.308	MGP_CBAJ_G0029449	Hnrnpd	55	35.593
MGP_CBAJ_G0030638	Tia1	83	35.443	MGP_CBAJ_G0025044	Celf2	51	35.443
MGP_CBAJ_G0030638	Tia1	78	36.000	MGP_CBAJ_G0022427	Ncbp2	51	36.000
MGP_CBAJ_G0030638	Tia1	95	33.835	MGP_CBAJ_G0024072	Pabpc2	57	35.443
MGP_CBAJ_G0030638	Tia1	60	31.285	MGP_CBAJ_G0028530	Trnau1ap	79	30.198
MGP_CBAJ_G0030638	Tia1	87	32.911	MGP_CBAJ_G0023910	Celf4	63	30.682