EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0030668 (Gene tree)
Gene ID: -
Gene Symbol: Rab7
Alias: Rab7a
Full Name: RAB7%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 54678 bases
Position: chr6:95317147-95371824
Accession: 105068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0078313	MMR_HSR1	PF01926.23	7.7e-07	1	1
MGP_CBAJ_P0078308	MMR_HSR1	PF01926.23	7.9e-07	1	1
MGP_CBAJ_P0078309	MMR_HSR1	PF01926.23	7.9e-07	1	1
MGP_CBAJ_P0078310	MMR_HSR1	PF01926.23	7.9e-07	1	1
MGP_CBAJ_P0078311	MMR_HSR1	PF01926.23	7.9e-07	1	1
MGP_CBAJ_P0078312	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0078312	-	424	-	MGP_CBAJ_P0078312	88 (aa)	-	-
MGP_CBAJ_T0078313	-	550	-	MGP_CBAJ_P0078313	98 (aa)	-	-
MGP_CBAJ_T0078310	-	1864	-	MGP_CBAJ_P0078310	207 (aa)	-	-
MGP_CBAJ_T0078311	-	1280	-	MGP_CBAJ_P0078311	207 (aa)	-	-
MGP_CBAJ_T0078309	-	1861	-	MGP_CBAJ_P0078309	207 (aa)	-	-
MGP_CBAJ_T0078308	-	1978	-	MGP_CBAJ_P0078308	207 (aa)	-	P51150

Gene Model

Click here to download MGP_CBAJ_G0030668's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0030668's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0030668	Rab7	99	40.206	MGP_CBAJ_G0019579	Rab15	81	33.520
MGP_CBAJ_G0030668	Rab7	92	46.667	MGP_CBAJ_G0026654	Rab22a	82	40.854
MGP_CBAJ_G0030668	Rab7	92	43.333	MGP_CBAJ_G0023237	Rab11b	93	40.491
MGP_CBAJ_G0030668	Rab7	90	47.727	MGP_CBAJ_G0018887	Rab5c	76	42.941
MGP_CBAJ_G0030668	Rab7	97	35.789	MGP_CBAJ_G0031247	Rasl2-9	76	33.140
MGP_CBAJ_G0030668	Rab7	98	60.417	MGP_CBAJ_G0035761	Rab9b	87	57.143
MGP_CBAJ_G0030668	Rab7	91	37.778	MGP_CBAJ_G0035514	Rab39b	76	34.545
MGP_CBAJ_G0030668	Rab7	91	46.067	MGP_CBAJ_G0029638	Rab35	81	37.500
MGP_CBAJ_G0030668	Rab7	91	43.820	MGP_CBAJ_G0025362	Rab14	86	40.299
MGP_CBAJ_G0030668	Rab7	79	31.169	MGP_CBAJ_G0034821	Mras	76	33.742
MGP_CBAJ_G0030668	Rab7	98	38.542	MGP_CBAJ_G0024398	Rab1b	83	37.647
MGP_CBAJ_G0030668	Rab7	91	44.944	MGP_CBAJ_G0027714	Rab2a	75	39.634
MGP_CBAJ_G0030668	Rab7	91	42.222	MGP_CBAJ_G0035341	Rab33a	69	39.881
MGP_CBAJ_G0030668	Rab7	92	43.333	MGP_CBAJ_G0017083	Rab36	63	36.571
MGP_CBAJ_G0030668	Rab7	90	48.864	MGP_CBAJ_G0023687	Rab12	57	37.278
MGP_CBAJ_G0030668	Rab7	93	42.857	MGP_CBAJ_G0034597	Rab11a	87	38.686
MGP_CBAJ_G0030668	Rab7	91	46.067	MGP_CBAJ_G0021002	Rab2b	80	40.881
MGP_CBAJ_G0030668	Rab7	76	33.121	MGP_CBAJ_G0031143	Kras	87	33.929
MGP_CBAJ_G0030668	Rab7	92	42.222	MGP_CBAJ_G0032181	Rab30	78	40.854
MGP_CBAJ_G0030668	Rab7	73	33.113	MGP_CBAJ_G0032883	Hras	83	33.951
MGP_CBAJ_G0030668	Rab7	91	47.191	MGP_CBAJ_G0034845	Rab6b	76	37.037
MGP_CBAJ_G0030668	Rab7	97	45.263	MGP_CBAJ_G0023588	Rab5a	80	41.243
MGP_CBAJ_G0030668	Rab7	94	35.870	MGP_CBAJ_G0019282	Dnajc27	60	36.145
MGP_CBAJ_G0030668	Rab7	94	49.462	MGP_CBAJ_G0019092	Rab37	76	41.071
MGP_CBAJ_G0030668	Rab7	91	47.191	MGP_CBAJ_G0032241	Rab6a	76	38.650
MGP_CBAJ_G0030668	Rab7	100	37.374	MGP_CBAJ_G0026890	Rab33b	72	37.870
MGP_CBAJ_G0030668	Rab7	95	59.140	MGP_CBAJ_G0035911	Rab9	86	54.913
MGP_CBAJ_G0030668	Rab7	92	47.778	MGP_CBAJ_G0023678	Rab31	82	44.512
MGP_CBAJ_G0030668	Rab7	90	48.864	MGP_CBAJ_G0023833	Rab18	79	39.521
MGP_CBAJ_G0030668	Rab7	98	39.583	MGP_CBAJ_G0017793	Rab1a	81	38.235
MGP_CBAJ_G0030668	Rab7	83	35.714	MGP_CBAJ_G0018930	Arl4d	58	32.520
MGP_CBAJ_G0030668	Rab7	97	32.632	MGP_CBAJ_G0029787	Ran	73	32.895
MGP_CBAJ_G0030668	Rab7	66	30.405	MGP_CBAJ_G0020722	Nkiras1	71	30.405
MGP_CBAJ_G0030668	Rab7	73	33.113	MGP_CBAJ_G0027365	Nras	95	33.108
MGP_CBAJ_G0030668	Rab7	94	43.478	MGP_CBAJ_G0015645	Rab23	70	33.918
MGP_CBAJ_G0030668	Rab7	91	44.944	MGP_CBAJ_G0027089	Rab25	75	39.157
MGP_CBAJ_G0030668	Rab7	91	40.449	MGP_CBAJ_G0021943	Rabl2	71	33.735
MGP_CBAJ_G0030668	Rab7	90	47.727	MGP_CBAJ_G0017609	Rab5b	77	42.941