EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CBAJ_G0030890 (Gene tree)
Gene ID
-
Gene Symbol
Apobec1
Alias
Cdar1
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 1
Gene Type
protein_coding
Species
Mus_musculus_cbaj
Status
putative
Strand
Minus strand
Length
28350 bases
Position
chr6:134005152-134033501
Accession
103298
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CBAJ_P0079498APOBEC_NPF08210.118.3e-3011
MGP_CBAJ_P0079499APOBEC_NPF08210.118.3e-3011
MGP_CBAJ_P0079500APOBEC_NPF08210.118.3e-3011
MGP_CBAJ_P0079501APOBEC_NPF08210.114.2e-1711
MGP_CBAJ_P0079502APOBEC_NPF08210.113.1e-1311
MGP_CBAJ_P0079498APOBEC_CPF05240.141.8e-2211
MGP_CBAJ_P0079499APOBEC_CPF05240.141.8e-2211
MGP_CBAJ_P0079500APOBEC_CPF05240.141.8e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CBAJ_T0079498-2270XM_006505401MGP_CBAJ_P0079498229 (aa)XP_006505464P51908
MGP_CBAJ_T0079499-2077-MGP_CBAJ_P0079499229 (aa)--
MGP_CBAJ_T0079500-2132-MGP_CBAJ_P0079500229 (aa)--
MGP_CBAJ_T0079501-666-MGP_CBAJ_P0079501121 (aa)--
MGP_CBAJ_T0079502-775-MGP_CBAJ_P0079502113 (aa)--
MGP_CBAJ_T0079503-372-MGP_CBAJ_P007950343 (aa)--
MGP_CBAJ_T0079504-360-MGP_CBAJ_P007950425 (aa)--
MGP_CBAJ_T0079505-560--- (aa)--
MGP_CBAJ_T0079506-520--- (aa)--
Gene Model
Click here to download MGP_CBAJ_G0030890's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0030890's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CBAJ_G0030890Apobec15639.706MGP_CBAJ_G0030889Aicda5341.509
MGP_CBAJ_G0030890Apobec17434.737MGP_CBAJ_G0021792Apobec38438.028

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us