EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0080191	ResIII	PF04851.15	1.1e-05	1	1
MGP_CBAJ_P0080183	ResIII	PF04851.15	1.5e-05	1	1
MGP_CBAJ_P0080191	DEAD	PF00270.29	1.7e-48	1	1
MGP_CBAJ_P0080183	DEAD	PF00270.29	2.8e-48	1	1
MGP_CBAJ_P0080190	DEAD	PF00270.29	4.3e-38	1	2
MGP_CBAJ_P0080190	DEAD	PF00270.29	4.3e-38	2	2
MGP_CBAJ_P0080185	DEAD	PF00270.29	1.1e-21	1	1
MGP_CBAJ_P0080188	DEAD	PF00270.29	3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0080188	-	551	-	MGP_CBAJ_P0080188	180 (aa)	-	-
MGP_CBAJ_T0080189	-	620	-	-	- (aa)	-	-
MGP_CBAJ_T0080194	-	3272	-	MGP_CBAJ_P0080194	61 (aa)	-	-
MGP_CBAJ_T0080193	-	791	-	-	- (aa)	-	-
MGP_CBAJ_T0080192	-	693	-	-	- (aa)	-	-
MGP_CBAJ_T0080191	-	1078	-	MGP_CBAJ_P0080191	359 (aa)	-	-
MGP_CBAJ_T0080190	-	1139	-	MGP_CBAJ_P0080190	379 (aa)	-	-
MGP_CBAJ_T0080183	-	1764	-	MGP_CBAJ_P0080183	455 (aa)	-	Q9CWX9
MGP_CBAJ_T0080184	-	435	-	MGP_CBAJ_P0080184	138 (aa)	-	-
MGP_CBAJ_T0080185	-	607	-	MGP_CBAJ_P0080185	196 (aa)	-	-
MGP_CBAJ_T0080186	-	978	-	-	- (aa)	-	-
MGP_CBAJ_T0080187	-	4017	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0031075	Ddx47	93	33.760	MGP_CBAJ_G0020639	Ddx4	56	34.271
MGP_CBAJ_G0031075	Ddx47	94	30.175	MGP_CBAJ_G0017036	Ddx50	54	31.204
MGP_CBAJ_G0031075	Ddx47	70	49.398	MGP_CBAJ_G0033733	Ddx28	72	33.079
MGP_CBAJ_G0031075	Ddx47	85	36.869	MGP_CBAJ_G0021780	Ddx17	57	37.374
MGP_CBAJ_G0031075	Ddx47	86	33.690	MGP_CBAJ_G0016656	D1Pas1	57	34.759
MGP_CBAJ_G0031075	Ddx47	96	41.667	MGP_CBAJ_G0019198	Eif4a3	87	41.667
MGP_CBAJ_G0031075	Ddx47	67	36.082	MGP_CBAJ_G0033791	Ddx19b	71	36.082
MGP_CBAJ_G0031075	Ddx47	91	34.218	MGP_CBAJ_G0034722	Ddx43	59	35.678
MGP_CBAJ_G0031075	Ddx47	95	45.824	MGP_CBAJ_G0033366	Ddx49	97	49.271
MGP_CBAJ_G0031075	Ddx47	86	38.889	MGP_CBAJ_G0017747	Ddx56	99	35.887
MGP_CBAJ_G0031075	Ddx47	83	32.011	MGP_CBAJ_G0018588	Ddx52	58	33.428
MGP_CBAJ_G0031075	Ddx47	90	32.095	MGP_CBAJ_G0033503	Ddx39	89	32.620
MGP_CBAJ_G0031075	Ddx47	86	46.875	MGP_CBAJ_G0019324	Ddx1	60	46.875
MGP_CBAJ_G0031075	Ddx47	74	37.261	MGP_CBAJ_G0019033	Ddx5	71	37.457
MGP_CBAJ_G0031075	Ddx47	84	42.424	MGP_CBAJ_G0018272	Eif4a1	86	41.667
MGP_CBAJ_G0031075	Ddx47	91	31.806	MGP_CBAJ_G0016283	Ddx59	60	33.602
MGP_CBAJ_G0031075	Ddx47	85	33.333	MGP_CBAJ_G0020311	Ddx41	58	35.556
MGP_CBAJ_G0031075	Ddx47	90	31.926	MGP_CBAJ_G0023338	Ddx39b	88	34.037
MGP_CBAJ_G0031075	Ddx47	88	37.705	MGP_CBAJ_G0016154	Ddx18	55	38.525
MGP_CBAJ_G0031075	Ddx47	86	33.690	MGP_CBAJ_G0035227	Ddx3x	56	34.492
MGP_CBAJ_G0031075	Ddx47	62	37.838	MGP_CBAJ_G0022380	Eif4a2	64	33.617
MGP_CBAJ_G0031075	Ddx47	81	35.977	MGP_CBAJ_G0029763	Ddx55	59	35.977
MGP_CBAJ_G0031075	Ddx47	84	35.652	MGP_CBAJ_G0025245	Ddx31	61	31.765