EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0031498 (Gene tree)
Gene ID: -
Gene Symbol: Irgc1
Alias: F630044M05Rik|Gm1102|Gm474|Ifgge|Iigp5|Irgc|LOC210145|LOC381989
Full Name: immunity-related GTPase family%2C cinema 1
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 24411 bases
Position: chr7:24382244-24406654
Accession: 2685948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0081741	MMR_HSR1	PF01926.23	6.3e-06	1	1
MGP_CBAJ_P0081742	MMR_HSR1	PF01926.23	6.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0081741	-	1835	XM_006539708	MGP_CBAJ_P0081741	463 (aa)	XP_006539771	A0A0U1RQ16
MGP_CBAJ_T0081743	-	383	-	MGP_CBAJ_P0081743	82 (aa)	-	-
MGP_CBAJ_T0081742	-	1737	-	MGP_CBAJ_P0081742	463 (aa)	-	-
MGP_CBAJ_T0081745	-	344	-	-	- (aa)	-	-
MGP_CBAJ_T0081744	-	659	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0031498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0031498's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0031498	Irgc1	82	34.987	MGP_CBAJ_G0017939	-	89	34.987
MGP_CBAJ_G0031498	Irgc1	71	30.183	MGP_CBAJ_G0017933	Irgm1	76	35.169
MGP_CBAJ_G0031498	Irgc1	82	34.987	MGP_CBAJ_G0017940	Tgtp2	89	34.987
MGP_CBAJ_G0031498	Irgc1	68	41.401	MGP_CBAJ_G0017941	Ifi47	75	41.401
MGP_CBAJ_G0031498	Irgc1	84	35.550	MGP_CBAJ_G0024162	Gm4841	91	35.806
MGP_CBAJ_G0031498	Irgc1	82	34.211	MGP_CBAJ_G0024163	F830016B08Rik	88	34.211
MGP_CBAJ_G0031498	Irgc1	68	36.909	MGP_CBAJ_G0024161	Gm4951	77	36.909
MGP_CBAJ_G0031498	Irgc1	82	33.158	MGP_CBAJ_G0024164	Iigp1	90	33.158
MGP_CBAJ_G0031498	Irgc1	65	33.775	MGP_CBAJ_G0018072	Igtp	68	33.775
MGP_CBAJ_G0031498	Irgc1	62	32.526	MGP_CBAJ_G0018073	Irgm2	69	32.526