EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0031596 (Gene tree)
Gene ID: -
Gene Symbol: Zfp780b
Alias: B230208L21Rik
Full Name: zinc finger protein 780B
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Minus strand
Length: 35953 bases
Position: chr7:28790413-28826365
Accession: 2444764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0082135	zf-C2H2	PF00096.26	4.1e-74	1	15
MGP_CBAJ_P0082135	zf-C2H2	PF00096.26	4.1e-74	2	15
MGP_CBAJ_P0082135	zf-C2H2	PF00096.26	4.1e-74	3	15
MGP_CBAJ_P0082135	zf-C2H2	PF00096.26	4.1e-74	4	15
MGP_CBAJ_P0082135	zf-C2H2	PF00096.26	4.1e-74	5	15
MGP_CBAJ_P0082135	zf-C2H2	PF00096.26	4.1e-74	6	15
MGP_CBAJ_P0082135	zf-C2H2	PF00096.26	4.1e-74	7	15
MGP_CBAJ_P0082135	zf-C2H2	PF00096.26	4.1e-74	8	15
MGP_CBAJ_P0082135	zf-C2H2	PF00096.26	4.1e-74	9	15
MGP_CBAJ_P0082135	zf-C2H2	PF00096.26	4.1e-74	10	15
MGP_CBAJ_P0082135	zf-C2H2	PF00096.26	4.1e-74	11	15
MGP_CBAJ_P0082135	zf-C2H2	PF00096.26	4.1e-74	12	15
MGP_CBAJ_P0082135	zf-C2H2	PF00096.26	4.1e-74	13	15
MGP_CBAJ_P0082135	zf-C2H2	PF00096.26	4.1e-74	14	15
MGP_CBAJ_P0082135	zf-C2H2	PF00096.26	4.1e-74	15	15
MGP_CBAJ_P0082135	zf-met	PF12874.7	8e-06	1	2
MGP_CBAJ_P0082135	zf-met	PF12874.7	8e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0082135	-	3466	XM_011250610	MGP_CBAJ_P0082135	646 (aa)	XP_011248912	E9Q2S6

Gene Model

Click here to download MGP_CBAJ_G0031596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0031596's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0031596	Zfp780b	82	42.308	MGP_CBAJ_G0033432	Zfp882	89	42.308
MGP_CBAJ_G0031596	Zfp780b	80	44.231	MGP_CBAJ_G0033431	Zfp709	89	44.231
MGP_CBAJ_G0031596	Zfp780b	79	41.948	MGP_CBAJ_G0022959	Zscan10	82	41.948
MGP_CBAJ_G0031596	Zfp780b	80	33.124	MGP_CBAJ_G0033644	Zfp319	95	33.117
MGP_CBAJ_G0031596	Zfp780b	81	45.862	MGP_CBAJ_G0032703	Zfp768	50	45.704
MGP_CBAJ_G0031596	Zfp780b	79	46.715	MGP_CBAJ_G0029510	Gfi1	100	46.715
MGP_CBAJ_G0031596	Zfp780b	80	44.401	MGP_CBAJ_G0022930	Zfp51	81	44.807
MGP_CBAJ_G0031596	Zfp780b	78	42.564	MGP_CBAJ_G0029174	Zbtb49	68	45.833
MGP_CBAJ_G0031596	Zfp780b	80	41.364	MGP_CBAJ_G0031486	Zfp235	73	41.199
MGP_CBAJ_G0031596	Zfp780b	89	41.048	MGP_CBAJ_G0034135	Zfp872	95	41.026
MGP_CBAJ_G0031596	Zfp780b	79	43.736	MGP_CBAJ_G0022928	Zfp677	79	43.736
MGP_CBAJ_G0031596	Zfp780b	79	45.923	MGP_CBAJ_G0031792	Zfp715	71	43.168
MGP_CBAJ_G0031596	Zfp780b	79	57.377	MGP_CBAJ_G0017981	Zfp454	70	48.626
MGP_CBAJ_G0031596	Zfp780b	85	46.923	MGP_CBAJ_G0033801	Zfp1	68	46.923
MGP_CBAJ_G0031596	Zfp780b	85	42.857	MGP_CBAJ_G0022951	Zfp945	91	42.857
MGP_CBAJ_G0031596	Zfp780b	78	38.750	MGP_CBAJ_G0028710	Zbtb17	57	38.750
MGP_CBAJ_G0031596	Zfp780b	82	49.138	MGP_CBAJ_G0030842	Zfp637	76	45.312
MGP_CBAJ_G0031596	Zfp780b	79	42.776	MGP_CBAJ_G0018126	Zfp867	89	42.776
MGP_CBAJ_G0031596	Zfp780b	79	40.196	MGP_CBAJ_G0031229	Zfp628	60	42.661
MGP_CBAJ_G0031596	Zfp780b	82	46.320	MGP_CBAJ_G0021719	Zfp251	69	46.320
MGP_CBAJ_G0031596	Zfp780b	89	36.066	MGP_CBAJ_G0030499	Prdm5	85	36.760
MGP_CBAJ_G0031596	Zfp780b	83	43.910	MGP_CBAJ_G0031493	Zfp94	77	44.257
MGP_CBAJ_G0031596	Zfp780b	74	42.708	MGP_CBAJ_G0031492	Zfp61	57	42.708
MGP_CBAJ_G0031596	Zfp780b	82	39.385	MGP_CBAJ_G0031491	Zfp93	63	39.385
MGP_CBAJ_G0031596	Zfp780b	81	43.750	MGP_CBAJ_G0031490	Zfp108	71	43.627
MGP_CBAJ_G0031596	Zfp780b	83	32.450	MGP_CBAJ_G0026625	Zfp64	74	32.826
MGP_CBAJ_G0031596	Zfp780b	87	41.886	MGP_CBAJ_G0020405	Zfp759	88	43.811
MGP_CBAJ_G0031596	Zfp780b	86	34.831	MGP_CBAJ_G0031237	Zfp865	80	30.800
MGP_CBAJ_G0031596	Zfp780b	79	47.195	MGP_CBAJ_G0020404	Rslcan18	70	47.195
MGP_CBAJ_G0031596	Zfp780b	79	52.446	MGP_CBAJ_G0031659	Zfp420	99	52.838
MGP_CBAJ_G0031596	Zfp780b	84	40.351	MGP_CBAJ_G0024306	Zfp236	81	35.802
MGP_CBAJ_G0031596	Zfp780b	80	43.548	MGP_CBAJ_G0026587	Zfp334	75	43.077
MGP_CBAJ_G0031596	Zfp780b	80	35.294	MGP_CBAJ_G0031523	Zfp574	94	35.561
MGP_CBAJ_G0031596	Zfp780b	80	33.898	MGP_CBAJ_G0018076	Zfp672	99	38.961
MGP_CBAJ_G0031596	Zfp780b	78	41.525	MGP_CBAJ_G0032707	E430018J23Rik	57	41.525
MGP_CBAJ_G0031596	Zfp780b	81	41.017	MGP_CBAJ_G0032704	-	68	41.017
MGP_CBAJ_G0031596	Zfp780b	79	41.379	MGP_CBAJ_G0031240	Zfp784	76	33.523
MGP_CBAJ_G0031596	Zfp780b	78	51.724	MGP_CBAJ_G0026162	Zfp661	67	51.724
MGP_CBAJ_G0031596	Zfp780b	87	32.685	MGP_CBAJ_G0030369	Repin1	100	32.151
MGP_CBAJ_G0031596	Zfp780b	79	45.902	MGP_CBAJ_G0031485	Zfp112	59	45.902
MGP_CBAJ_G0031596	Zfp780b	79	50.641	MGP_CBAJ_G0020428	-	59	50.114