EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0031632 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpl
Alias: C79783|D830027H13Rik|Hnrpl
Full Name: heterogeneous nuclear ribonucleoprotein L
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 14970 bases
Position: chr7:29831474-29846443
Accession: 104816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0082251	RRM_5	PF13893.6	2.4e-60	1	2
MGP_CBAJ_P0082251	RRM_5	PF13893.6	2.4e-60	2	2
MGP_CBAJ_P0082255	RRM_5	PF13893.6	2.4e-60	1	2
MGP_CBAJ_P0082255	RRM_5	PF13893.6	2.4e-60	2	2
MGP_CBAJ_P0082256	RRM_5	PF13893.6	2.9e-60	1	2
MGP_CBAJ_P0082256	RRM_5	PF13893.6	2.9e-60	2	2
MGP_CBAJ_P0082253	RRM_5	PF13893.6	1.9e-59	1	2
MGP_CBAJ_P0082253	RRM_5	PF13893.6	1.9e-59	2	2
MGP_CBAJ_P0082251	RRM_1	PF00076.22	3.3e-22	1	2
MGP_CBAJ_P0082251	RRM_1	PF00076.22	3.3e-22	2	2
MGP_CBAJ_P0082255	RRM_1	PF00076.22	3.3e-22	1	2
MGP_CBAJ_P0082255	RRM_1	PF00076.22	3.3e-22	2	2
MGP_CBAJ_P0082256	RRM_1	PF00076.22	4.2e-22	1	2
MGP_CBAJ_P0082256	RRM_1	PF00076.22	4.2e-22	2	2
MGP_CBAJ_P0082253	RRM_1	PF00076.22	1.6e-16	1	1
MGP_CBAJ_P0082254	RRM_1	PF00076.22	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0082252	-	2273	-	-	- (aa)	-	-
MGP_CBAJ_T0082253	-	1896	-	MGP_CBAJ_P0082253	456 (aa)	-	-
MGP_CBAJ_T0082251	-	2677	XM_006539556	MGP_CBAJ_P0082251	586 (aa)	XP_006539619	Q8R081
MGP_CBAJ_T0082256	-	2178	-	MGP_CBAJ_P0082256	614 (aa)	-	-
MGP_CBAJ_T0082257	-	2424	-	-	- (aa)	-	-
MGP_CBAJ_T0082254	-	502	-	MGP_CBAJ_P0082254	112 (aa)	-	-
MGP_CBAJ_T0082255	-	2140	-	MGP_CBAJ_P0082255	586 (aa)	-	-
MGP_CBAJ_T0082258	-	1848	-	MGP_CBAJ_P0082258	201 (aa)	-	-
MGP_CBAJ_T0082259	-	504	-	-	- (aa)	-	-
MGP_CBAJ_T0082261	-	1087	-	-	- (aa)	-	-
MGP_CBAJ_T0082263	-	670	-	-	- (aa)	-	-
MGP_CBAJ_T0082260	-	637	-	-	- (aa)	-	-
MGP_CBAJ_T0082262	-	768	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CBAJ_G0031632's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0031632's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0031632	Hnrnpl	55	36.207	MGP_CBAJ_G0028002	Ptbp3	83	35.537
MGP_CBAJ_G0031632	Hnrnpl	100	63.393	MGP_CBAJ_G0023752	Hnrnpll	80	58.065
MGP_CBAJ_G0031632	Hnrnpl	77	30.645	MGP_CBAJ_G0027502	Ptbp2	77	30.645
MGP_CBAJ_G0031632	Hnrnpl	95	30.045	MGP_CBAJ_G0017198	Ptbp1	80	30.583