EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CBAJ_G0031659 (Gene tree)
Gene ID: -
Gene Symbol: Zfp420
Alias: B230119D13|B230312I18Rik|mszf59-1|mszf70
Full Name: zinc finger protein 420
Gene Type: protein_coding
Species: Mus_musculus_cbaj
Status: putative
Strand: Plus strand
Length: 17945 bases
Position: chr7:31146309-31164253
Accession: 2444666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_CBAJ_P0082377	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_CBAJ_P0082380	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_CBAJ_P0082377	zf-met	PF12874.7	8.3e-08	1	1
MGP_CBAJ_P0082380	zf-met	PF12874.7	8.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CBAJ_T0082379	-	2982	-	-	- (aa)	-	-
MGP_CBAJ_T0082378	-	689	-	-	- (aa)	-	-
MGP_CBAJ_T0082380	-	2744	-	MGP_CBAJ_P0082380	578 (aa)	-	-
MGP_CBAJ_T0082381	-	768	-	-	- (aa)	-	-
MGP_CBAJ_T0082377	-	2537	XM_006539873	MGP_CBAJ_P0082377	578 (aa)	XP_006539936	Q7TMN8

Gene Model

Click here to download MGP_CBAJ_G0031659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CBAJ_G0031659's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CBAJ_G0031659	Zfp420	98	56.275	MGP_CBAJ_G0020404	Rslcan18	71	56.275
MGP_CBAJ_G0031659	Zfp420	99	51.196	MGP_CBAJ_G0020405	Zfp759	88	50.364
MGP_CBAJ_G0031659	Zfp420	97	56.897	MGP_CBAJ_G0030842	Zfp637	75	54.167
MGP_CBAJ_G0031659	Zfp420	98	48.744	MGP_CBAJ_G0029174	Zbtb49	89	50.000
MGP_CBAJ_G0031659	Zfp420	99	52.838	MGP_CBAJ_G0031596	Zfp780b	79	52.446
MGP_CBAJ_G0031659	Zfp420	99	54.233	MGP_CBAJ_G0034135	Zfp872	86	53.608
MGP_CBAJ_G0031659	Zfp420	99	56.115	MGP_CBAJ_G0032703	Zfp768	51	56.071
MGP_CBAJ_G0031659	Zfp420	99	52.489	MGP_CBAJ_G0026587	Zfp334	75	52.489
MGP_CBAJ_G0031659	Zfp420	99	36.677	MGP_CBAJ_G0031523	Zfp574	93	37.533
MGP_CBAJ_G0031659	Zfp420	98	49.524	MGP_CBAJ_G0018076	Zfp672	89	49.524
MGP_CBAJ_G0031659	Zfp420	98	59.532	MGP_CBAJ_G0017981	Zfp454	71	57.803
MGP_CBAJ_G0031659	Zfp420	99	60.656	MGP_CBAJ_G0021719	Zfp251	78	60.656
MGP_CBAJ_G0031659	Zfp420	98	52.151	MGP_CBAJ_G0018126	Zfp867	82	52.151
MGP_CBAJ_G0031659	Zfp420	99	63.529	MGP_CBAJ_G0020428	-	55	63.380
MGP_CBAJ_G0031659	Zfp420	98	50.000	MGP_CBAJ_G0033432	Zfp882	85	50.000
MGP_CBAJ_G0031659	Zfp420	100	54.023	MGP_CBAJ_G0033431	Zfp709	91	54.310
MGP_CBAJ_G0031659	Zfp420	98	37.309	MGP_CBAJ_G0033644	Zfp319	93	36.919
MGP_CBAJ_G0031659	Zfp420	99	53.722	MGP_CBAJ_G0031485	Zfp112	59	53.722
MGP_CBAJ_G0031659	Zfp420	99	49.905	MGP_CBAJ_G0022951	Zfp945	97	50.469
MGP_CBAJ_G0031659	Zfp420	97	41.080	MGP_CBAJ_G0022959	Zscan10	78	40.179
MGP_CBAJ_G0031659	Zfp420	95	59.426	MGP_CBAJ_G0026162	Zfp661	72	59.426
MGP_CBAJ_G0031659	Zfp420	98	47.967	MGP_CBAJ_G0032707	E430018J23Rik	67	47.967
MGP_CBAJ_G0031659	Zfp420	98	47.973	MGP_CBAJ_G0032704	-	66	47.973
MGP_CBAJ_G0031659	Zfp420	99	57.692	MGP_CBAJ_G0033801	Zfp1	78	57.692
MGP_CBAJ_G0031659	Zfp420	98	54.579	MGP_CBAJ_G0022930	Zfp51	88	54.579
MGP_CBAJ_G0031659	Zfp420	98	38.136	MGP_CBAJ_G0031229	Zfp628	60	38.748
MGP_CBAJ_G0031659	Zfp420	99	56.553	MGP_CBAJ_G0031486	Zfp235	72	56.553
MGP_CBAJ_G0031659	Zfp420	99	57.095	MGP_CBAJ_G0031493	Zfp94	78	57.095
MGP_CBAJ_G0031659	Zfp420	99	55.310	MGP_CBAJ_G0031492	Zfp61	59	55.310
MGP_CBAJ_G0031659	Zfp420	99	50.298	MGP_CBAJ_G0031491	Zfp93	70	50.298
MGP_CBAJ_G0031659	Zfp420	99	55.556	MGP_CBAJ_G0031490	Zfp108	79	55.556
MGP_CBAJ_G0031659	Zfp420	98	39.286	MGP_CBAJ_G0026625	Zfp64	69	36.504
MGP_CBAJ_G0031659	Zfp420	97	44.706	MGP_CBAJ_G0028710	Zbtb17	69	44.706
MGP_CBAJ_G0031659	Zfp420	98	54.648	MGP_CBAJ_G0022928	Zfp677	89	54.648
MGP_CBAJ_G0031659	Zfp420	95	30.691	MGP_CBAJ_G0031238	-	66	31.343
MGP_CBAJ_G0031659	Zfp420	99	37.634	MGP_CBAJ_G0031237	Zfp865	80	37.634
MGP_CBAJ_G0031659	Zfp420	97	49.194	MGP_CBAJ_G0029510	Gfi1	100	48.507
MGP_CBAJ_G0031659	Zfp420	99	47.059	MGP_CBAJ_G0024306	Zfp236	79	47.059
MGP_CBAJ_G0031659	Zfp420	95	41.722	MGP_CBAJ_G0030499	Prdm5	91	48.387
MGP_CBAJ_G0031659	Zfp420	99	51.052	MGP_CBAJ_G0031792	Zfp715	71	51.316
MGP_CBAJ_G0031659	Zfp420	98	46.711	MGP_CBAJ_G0030369	Repin1	93	46.711